RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 MARCH10Q8NA82 808 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-229ENST00000641891 RNF214Q8ND24 703 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 FAM177BA6PVY3 158 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 FOXP2O15409 715 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 PDE8AO60658 829 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 TICAM2Q86XR7 235 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 VGLL2Q8N8G2 317 aa20.12■□□□□ 0.81
PHGDH-229ENST00000641891 ANP32BQ92688 251 aaKnown RBP20.12■□□□□ 0.81
PHGDH-229ENST00000641891 MCAMP43121 646 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 FGD1P98174 961 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 DHX32Q7L7V1 743 aaKnown RBP20.11■□□□□ 0.81
PHGDH-229ENST00000641891 PDCP20941 246 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
PHGDH-229ENST00000641891 SCRN1Q12765 414 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 TSPY26PQ9H489 355 aa20.11■□□□□ 0.81
PHGDH-229ENST00000641891 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 LTBP4Q8N2S1 1624 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 ATP6V1AP38606 617 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 CRKLP46109 303 aaKnown RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 APOBRQ0VD83 1088 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 PUS7LQ9H0K6 701 aaKnown RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 EXOSC10Q01780 885 aaKnown RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 CCDC183Q5T5S1 534 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 SUSD4Q5VX71 490 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 CDCA7Q9BWT1 371 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-229ENST00000641891 CCDC87Q9NVE4 849 aa20.1■□□□□ 0.81
PHGDH-229ENST00000641891 ITPK1Q13572 414 aa20.09■□□□□ 0.81
PHGDH-229ENST00000641891 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-229ENST00000641891 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
PHGDH-229ENST00000641891 ESPNB1AK53 854 aa20.08■□□□□ 0.81
PHGDH-229ENST00000641891 HAND2P61296 217 aa20.08■□□□□ 0.81
PHGDH-229ENST00000641891 THRAP3Q9Y2W1 955 aaKnown RBP20.08■□□□□ 0.81
PHGDH-229ENST00000641891 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.8
PHGDH-229ENST00000641891 PHF14O94880 888 aa20.08■□□□□ 0.8
PHGDH-229ENST00000641891 ZFYP08048 801 aaPredicted RBP20.08■□□□□ 0.8
PHGDH-229ENST00000641891 SIK1P57059 783 aa20.08■□□□□ 0.8
PHGDH-229ENST00000641891 TTC6Q86TZ1 520 aa20.08■□□□□ 0.8
PHGDH-229ENST00000641891 APPBP2Q92624 585 aa20.08■□□□□ 0.8
PHGDH-229ENST00000641891 LRP5O75197 1615 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 PFKFB2O60825 505 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 PDE8BO95263 885 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
PHGDH-229ENST00000641891 SPATA31A5Q5VU36 1347 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 SPATA31A7Q8IWB4 1347 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 MYH7P12883 1935 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 ABCC12Q96J65 1359 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 PHKA1P46020 1223 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 KRT85P78386 507 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
PHGDH-229ENST00000641891 CCT2P78371 535 aaKnown RBP20.06■□□□□ 0.8
PHGDH-229ENST00000641891 PIH1D3Q9NQM4 214 aaKnown RBP20.06■□□□□ 0.8
PHGDH-229ENST00000641891 CTDNEP1O95476 244 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 FGAP02671 866 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 FOSBP53539 338 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 AGXT2Q9BYV1 514 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 NCOA5Q9HCD5 579 aaKnown RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 GPHNQ9NQX3 736 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 TFIP11Q9UBB9 837 aaKnown RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 MYO5AQ9Y4I1 1855 aaKnown RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 SNAP23O00161 211 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 GPAA1O43292 621 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 PPFIA3O75145 1194 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 CAMTA2O94983 1202 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 CCDC102BQ68D86 513 aa20.05■□□□□ 0.8
PHGDH-229ENST00000641891 NSUN7Q8NE18 718 aaKnown RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 MYH14Q7Z406 1995 aaKnown RBP20.05■□□□□ 0.8
PHGDH-229ENST00000641891 KCNQ2O43526 872 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 PDIA4P13667 645 aaKnown RBP20.04■□□□□ 0.8
PHGDH-229ENST00000641891 SMARCC2Q8TAQ2 1214 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 PDLIM2Q96JY6 352 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 SEC31BQ9NQW1 1179 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 RREB1Q92766 1687 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 CLCN1P35523 988 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
PHGDH-229ENST00000641891 ADD2P35612 726 aa20.03■□□□□ 0.8
PHGDH-229ENST00000641891 RESTQ13127 1097 aa20.03■□□□□ 0.8
PHGDH-229ENST00000641891 UTP14AQ9BVJ6 771 aaKnown RBP20.03■□□□□ 0.8
PHGDH-229ENST00000641891 CTNNA3Q9UI47 895 aa20.03■□□□□ 0.8
PHGDH-229ENST00000641891 PTPDC1A2A3K4 754 aa20.02■□□□□ 0.8
PHGDH-229ENST00000641891 PUM3Q15397 648 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 IMMTQ16891 758 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 SLC9C2Q5TAH2 1124 aa20.02■□□□□ 0.8
PHGDH-229ENST00000641891 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
PHGDH-229ENST00000641891 FAM184AQ8NB25 1140 aa20.02■□□□□ 0.8
PHGDH-229ENST00000641891 ZNF512BQ96KM6 892 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.02■□□□□ 0.81e-14■□□□□ 11
PHGDH-229ENST00000641891 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 IDH1O75874 414 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 FGFR2P21802 821 aa20.02■□□□□ 0.8
PHGDH-229ENST00000641891 PDIA3P30101 505 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 LLPHQ9BRT6 129 aaKnown RBP20.02■□□□□ 0.8
PHGDH-229ENST00000641891 MROH5Q6ZUA9 1318 aa20.01■□□□□ 0.79
PHGDH-229ENST00000641891 H3BQV1 296 aa20.01■□□□□ 0.79
PHGDH-229ENST00000641891 ARID4AP29374 1257 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-229ENST00000641891 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms