RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
PHGDH-219ENST00000641513 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 LAMA4Q16363 1823 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 RAD50Q92878 1312 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 SNAP23O00161 211 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-219ENST00000641513 BAG6P46379 1132 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 RABEP1Q15276 862 aa10.65□□□□□ -0.7
PHGDH-219ENST00000641513 LRRFIP1Q32MZ4 808 aaKnown RBP10.65□□□□□ -0.7
PHGDH-219ENST00000641513 BSDC1Q9NW68 430 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-219ENST00000641513 POLRMTO00411 1230 aaKnown RBP10.64□□□□□ -0.71
PHGDH-219ENST00000641513 EPB41L2O43491 1005 aaKnown RBP10.64□□□□□ -0.71
PHGDH-219ENST00000641513 FGFR2P21802 821 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 ZAP70P43403 619 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 PHKA1P46020 1223 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 DDR1Q08345 913 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 SCARF1Q14162 830 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 CCDC102BQ68D86 513 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 MSL1Q68DK7 614 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
PHGDH-219ENST00000641513 KIF2CQ99661 725 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 LSG1Q9H089 658 aaKnown RBP10.64□□□□□ -0.71
PHGDH-219ENST00000641513 ISY1Q9ULR0 285 aaKnown RBP10.64□□□□□ -0.71
PHGDH-219ENST00000641513 MINPP1Q9UNW1 487 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 CHD4Q14839 1912 aa10.64□□□□□ -0.71
PHGDH-219ENST00000641513 CCDC171Q6TFL3 1326 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 PNPLA7Q6ZV29 1317 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
PHGDH-219ENST00000641513 MCAMP43121 646 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 PTH1RQ03431 593 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 GRAPQ13588 217 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 WASHC4Q2M389 1173 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 PPP4R3CPQ6ZMV5 832 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 GRAPLQ8TC17 118 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-219ENST00000641513 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
PHGDH-219ENST00000641513 ANKRD2Q9GZV1 360 aa10.63□□□□□ -0.71
PHGDH-219ENST00000641513 COL11A2P13942 1736 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-219ENST00000641513 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 ST18O60284 1047 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 ARID4AP29374 1257 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-219ENST00000641513 BCAMP50895 628 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 UBE4AQ14139 1066 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 TTF1Q15361 905 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-219ENST00000641513 CAVIN4Q5BKX8 364 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
PHGDH-219ENST00000641513 GNL3LQ9NVN8 582 aaKnown RBP10.62□□□□□ -0.71
PHGDH-219ENST00000641513 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
PHGDH-219ENST00000641513 IDH1O75874 414 aaKnown RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 CHGBP05060 677 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 HSP90AA1P07900 732 aaKnown RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 MMP10P09238 476 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 HSPA4P34932 840 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 GYG1P46976 350 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 ANAPC15P60006 121 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 SLC15A2Q16348 729 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 SLFNL1Q499Z3 407 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 L1TD1Q5T7N2 865 aaKnown RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 PRPF40BQ6NWY9 871 aaKnown RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 CLEC17AQ6ZS10 378 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 DEFB132Q7Z7B7 95 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 ZNF589Q86UQ0 364 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 IL17RAQ96F46 866 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 HELLSQ9NRZ9 838 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 IQSEC3Q9UPP2 1182 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 RBM8AQ9Y5S9 174 aaKnown RBP10.61□□□□□ -0.71
PHGDH-219ENST00000641513 MED23Q9ULK4 1368 aa10.61□□□□□ -0.71
PHGDH-219ENST00000641513 CYP2E1P05181 493 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-219ENST00000641513 MCM4P33991 863 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 NEK4P51957 841 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 ZMYM1Q5SVZ6 1142 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-219ENST00000641513 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-219ENST00000641513 PIH1D3Q9NQM4 214 aaKnown RBP10.6□□□□□ -0.71
PHGDH-219ENST00000641513 HMG20BQ9P0W2 317 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
PHGDH-219ENST00000641513 ZNF804BA4D1E1 1349 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 LRRC37AA6NMS7 1700 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 WTIPA6NIX2 430 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-219ENST00000641513 K7ELQ4 463 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-219ENST00000641513 M0R2C6 588 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 ZKSCAN1P17029 563 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-219ENST00000641513 RASGRF1Q13972 1273 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 SLC9C2Q5TAH2 1124 aa10.59□□□□□ -0.71
PHGDH-219ENST00000641513 TICAM2Q86XR7 235 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms