RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FBXO33Q7Z6M2 555 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-225ENST00000640900 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
SCARB2-225ENST00000640900 TBC1D16Q8TBP0 767 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-225ENST00000640900 PSMD1Q99460 953 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 IL1RAPL2Q9NP60 686 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 DBNLQ9UJU6 430 aaKnown RBP11.23□□□□□ -0.61
SCARB2-225ENST00000640900 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
SCARB2-225ENST00000640900 A0A1B0GUL7 405 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 ATP2B3Q16720 1220 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 MPNDQ8N594 471 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-225ENST00000640900 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 LTBP3Q9NS15 1303 aa11.22□□□□□ -0.61
SCARB2-225ENST00000640900 UTRNP46939 3433 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 MED23Q9ULK4 1368 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 AOX1Q06278 1338 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 C21orf2O43822 256 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 ADORA1P30542 326 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 AACSQ86V21 672 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 FAM84BQ96KN1 310 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-225ENST00000640900 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 TLR7Q9NYK1 1049 aaKnown RBP11.21□□□□□ -0.61
SCARB2-225ENST00000640900 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-225ENST00000640900 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
SCARB2-225ENST00000640900 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
SCARB2-225ENST00000640900 APBB1O00213 710 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 SLC5A1P13866 664 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 KLRK1P26718 216 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 PDE1AP54750 535 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCARB2-225ENST00000640900 CCDC8Q9H0W5 538 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-225ENST00000640900 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
SCARB2-225ENST00000640900 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
SCARB2-225ENST00000640900 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 NFKBIEO00221 500 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 UFL1O94874 794 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
SCARB2-225ENST00000640900 ATP5JP18859 108 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 MX1P20591 662 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-225ENST00000640900 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARB2-225ENST00000640900 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-225ENST00000640900 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
SCARB2-225ENST00000640900 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
SCARB2-225ENST00000640900 IL1R1P14778 569 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCARB2-225ENST00000640900 PHKA1P46020 1223 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 PRELPP51888 382 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 SUPT20HQ8NEM7 779 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
SCARB2-225ENST00000640900 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
SCARB2-225ENST00000640900 COL4A5P29400 1685 aa11.17□□□□□ -0.62
SCARB2-225ENST00000640900 BCAMP50895 628 aa11.17□□□□□ -0.62
SCARB2-225ENST00000640900 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-225ENST00000640900 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-225ENST00000640900 CHD4Q14839 1912 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 SEMA3EO15041 775 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 GLRX3O76003 335 aaKnown RBP11.16□□□□□ -0.62
SCARB2-225ENST00000640900 UQCRFS1P1P0C7P4 283 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 HIBADHP31937 336 aaKnown RBP11.16□□□□□ -0.62
SCARB2-225ENST00000640900 GYG1P46976 350 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 KCNJ4P48050 445 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 SCARF1Q14162 830 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 GPR101Q96P66 508 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-225ENST00000640900 EYA3Q99504 573 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 HAUS7Q99871 368 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
SCARB2-225ENST00000640900 COL1A1P02452 1464 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-225ENST00000640900 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 GSPT1P15170 499 aaKnown RBP11.15□□□□□ -0.62
SCARB2-225ENST00000640900 MCAMP43121 646 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 RASGRF1Q13972 1273 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 CCDC158Q5M9N0 1113 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
SCARB2-225ENST00000640900 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
SCARB2-225ENST00000640900 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-225ENST00000640900 SBF1O95248 1867 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms