RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 CLCN1P35523 988 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 KRT85P78386 507 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 SCRN1Q12765 414 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 DDB1Q16531 1140 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 ACSBG1Q96GR2 724 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 PDE8AO60658 829 aa15.8■□□□□ 0.12
SPIN3-235ENST00000640104 LAMA4Q16363 1823 aa15.79■□□□□ 0.12
SPIN3-235ENST00000640104 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
SPIN3-235ENST00000640104 ZFYP08048 801 aaPredicted RBP15.79■□□□□ 0.12
SPIN3-235ENST00000640104 DDX11Q96FC9 970 aa15.79■□□□□ 0.12
SPIN3-235ENST00000640104 APOBRQ0VD83 1088 aa15.79■□□□□ 0.12
SPIN3-235ENST00000640104 NUP98P52948 1817 aa15.79■□□□□ 0.12
SPIN3-235ENST00000640104 MCAMP43121 646 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 EXOSC10Q01780 885 aaKnown RBP15.78■□□□□ 0.12
SPIN3-235ENST00000640104 CHST3Q7LGC8 479 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 TTC6Q86TZ1 520 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 FOXP2O15409 715 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 APPBP2Q92624 585 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-235ENST00000640104 PUS7LQ9H0K6 701 aaKnown RBP15.78■□□□□ 0.12
SPIN3-235ENST00000640104 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
SPIN3-235ENST00000640104 FAM177BA6PVY3 158 aa15.77■□□□□ 0.12
SPIN3-235ENST00000640104 PFKFB2O60825 505 aa15.77■□□□□ 0.12
SPIN3-235ENST00000640104 MYH3P11055 1940 aa15.77■□□□□ 0.12
SPIN3-235ENST00000640104 SLIT2O94813 1529 aa15.77■□□□□ 0.11
SPIN3-235ENST00000640104 ATP6V1AP38606 617 aa15.77■□□□□ 0.11
SPIN3-235ENST00000640104 EIF5P55010 431 aaKnown RBP15.77■□□□□ 0.11
SPIN3-235ENST00000640104 HAND2P61296 217 aa15.77■□□□□ 0.11
SPIN3-235ENST00000640104 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.11
SPIN3-235ENST00000640104 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
SPIN3-235ENST00000640104 NAP1L2Q9ULW6 460 aaPredicted RBP15.77■□□□□ 0.11
SPIN3-235ENST00000640104 PDE8BO95263 885 aa15.76■□□□□ 0.11
SPIN3-235ENST00000640104 AGXT2Q9BYV1 514 aa15.76■□□□□ 0.11
SPIN3-235ENST00000640104 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
SPIN3-235ENST00000640104 LETM1O95202 739 aaPredicted RBP15.76■□□□□ 0.11
SPIN3-235ENST00000640104 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
SPIN3-235ENST00000640104 TFIP11Q9UBB9 837 aaKnown RBP15.76■□□□□ 0.11
SPIN3-235ENST00000640104 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
SPIN3-235ENST00000640104 THRAP3Q9Y2W1 955 aaKnown RBP15.76■□□□□ 0.11
SPIN3-235ENST00000640104 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 H3BQV1 296 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 IFFO2Q5TF58 517 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 MARCH10Q8NA82 808 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 NSUN7Q8NE18 718 aaKnown RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 GPAA1O43292 621 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 FGAP02671 866 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 IMMTQ16891 758 aaKnown RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 HELBQ8NG08 1087 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 LLPHQ9BRT6 129 aaKnown RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 ELP1O95163 1332 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 NRAPQ86VF7 1730 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 SIK1P57059 783 aa15.75■□□□□ 0.11
SPIN3-235ENST00000640104 NCOA5Q9HCD5 579 aaKnown RBP15.75■□□□□ 0.11
SPIN3-235ENST00000640104 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 PHKA1P46020 1223 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 FOSBP53539 338 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 RESTQ13127 1097 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 ITPK1Q13572 414 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 ZSCAN30Q86W11 494 aa15.74■□□□□ 0.11
SPIN3-235ENST00000640104 ZNF512BQ96KM6 892 aaPredicted RBP15.74■□□□□ 0.11
SPIN3-235ENST00000640104 SCAND2PQ9GZW5 306 aaPredicted RBP15.74■□□□□ 0.11
SPIN3-235ENST00000640104 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
SPIN3-235ENST00000640104 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
SPIN3-235ENST00000640104 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
SPIN3-235ENST00000640104 ADD2P35612 726 aa15.73■□□□□ 0.11
SPIN3-235ENST00000640104 SLC9C2Q5TAH2 1124 aa15.73■□□□□ 0.11
SPIN3-235ENST00000640104 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
SPIN3-235ENST00000640104 PHLPP1O60346 1717 aa15.73■□□□□ 0.11
SPIN3-235ENST00000640104 PDIA3P30101 505 aaKnown RBP15.73■□□□□ 0.11
SPIN3-235ENST00000640104 PUM3Q15397 648 aaKnown RBP15.73■□□□□ 0.11
SPIN3-235ENST00000640104 LEO1Q8WVC0 666 aaPredicted RBP15.73■□□□□ 0.11
SPIN3-235ENST00000640104 LRP5O75197 1615 aa15.73■□□□□ 0.11
SPIN3-235ENST00000640104 AKAP11Q9UKA4 1901 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
SPIN3-235ENST00000640104 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 UTP14AQ9BVJ6 771 aaKnown RBP15.72■□□□□ 0.11
SPIN3-235ENST00000640104 MROH5Q6ZUA9 1318 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 LIG1P18858 919 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
SPIN3-235ENST00000640104 LPIN2Q92539 896 aa15.72■□□□□ 0.11
SPIN3-235ENST00000640104 ZNF274Q96GC6 653 aaPredicted RBP15.72■□□□□ 0.11
SPIN3-235ENST00000640104 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms