RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
SCARB2-220ENST00000640076 BCORQ6W2J9 1755 aa9.93□□□□□ -0.82
SCARB2-220ENST00000640076 ANKRD36CQ5JPF3 1778 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 ATP9BO43861 1147 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 GNAI3P08754 354 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 C7P10643 843 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
SCARB2-220ENST00000640076 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 GCKRQ14397 625 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 C4AP0C0L4 1744 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 BAG6P46379 1132 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
SCARB2-220ENST00000640076 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
SCARB2-220ENST00000640076 DPH6Q7L8W6 267 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 ISCA1Q9BUE6 129 aa9.92□□□□□ -0.82
SCARB2-220ENST00000640076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
SCARB2-220ENST00000640076 GRM8O00222 908 aa9.91□□□□□ -0.82
SCARB2-220ENST00000640076 NBPF7P0C2Y1 421 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-220ENST00000640076 UBTFL1P0CB47 393 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-220ENST00000640076 HSP90AB3PQ58FF7 597 aa9.91□□□□□ -0.82
SCARB2-220ENST00000640076 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
SCARB2-220ENST00000640076 C9orf78Q9NZ63 289 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-220ENST00000640076 NARFQ9UHQ1 456 aa9.91□□□□□ -0.82
SCARB2-220ENST00000640076 UTYO14607 1347 aa9.91□□□□□ -0.82
SCARB2-220ENST00000640076 PHF14O94880 888 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 GNAI2P04899 355 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 SERPINB4P48594 390 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 DEFB132Q7Z7B7 95 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 EPAS1Q99814 870 aa9.9□□□□□ -0.82
SCARB2-220ENST00000640076 CWC25Q9NXE8 425 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-220ENST00000640076 GPTP24298 496 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 ZNF827Q17R98 1081 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 CLEC4GQ6UXB4 293 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 ZNF662Q6ZS27 426 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.83
SCARB2-220ENST00000640076 ZNF34Q8IZ26 560 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 SRP68Q9UHB9 627 aaKnown RBP9.9□□□□□ -0.83
SCARB2-220ENST00000640076 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.83
SCARB2-220ENST00000640076 ZNF652Q9Y2D9 606 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 TUBGCP6Q96RT7 1819 aa9.9□□□□□ -0.83
SCARB2-220ENST00000640076 ZPR1O75312 459 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 CD46P15529 392 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 RFC4P35249 363 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
SCARB2-220ENST00000640076 USPL1Q5W0Q7 1092 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 FBXO33Q7Z6M2 555 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 NLRP10Q86W26 655 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 NUTM1Q86Y26 1132 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-220ENST00000640076 BCL2L12Q9HB09 334 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
SCARB2-220ENST00000640076 UBN2Q6ZU65 1347 aa9.89□□□□□ -0.83
SCARB2-220ENST00000640076 USP42Q9H9J4 1324 aaKnown RBP9.89□□□□□ -0.83
SCARB2-220ENST00000640076 NDUFV2P19404 249 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 CASP7P55210 303 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 CEP85Q6P2H3 762 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 UBE3BQ7Z3V4 1068 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 SIRT2Q8IXJ6 389 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 TFCP2L1Q9NZI6 479 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 BIN2Q9UBW5 565 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-220ENST00000640076 H7C1W4 665 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 IGHDP01880 384 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 HDAC1Q13547 482 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-220ENST00000640076 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 KAZALD1Q96I82 304 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-220ENST00000640076 HDAC5Q9UQL6 1122 aa9.88□□□□□ -0.83
SCARB2-220ENST00000640076 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCARB2-220ENST00000640076 MARCH6O60337 910 aa9.87□□□□□ -0.83
SCARB2-220ENST00000640076 TAGLNQ01995 201 aaKnown RBP9.87□□□□□ -0.83
SCARB2-220ENST00000640076 PARP10Q53GL7 1025 aa9.87□□□□□ -0.83
SCARB2-220ENST00000640076 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-220ENST00000640076 ANKRD44Q8N8A2 993 aa9.87□□□□□ -0.83
SCARB2-220ENST00000640076 JARID2Q92833 1246 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-220ENST00000640076 SUCLG2Q96I99 432 aa9.87□□□□□ -0.83
SCARB2-220ENST00000640076 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-220ENST00000640076 PCCAP05165 728 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 ERCC5P28715 1186 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 TBC1D9BQ66K14 1250 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 ZBTB38Q8NAP3 1195 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 FLAD1Q8NFF5 587 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 PNPLA7Q6ZV29 1317 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 GYS1P13807 737 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 SUSD4Q5VX71 490 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 CENPQQ7L2Z9 268 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 NOP9Q86U38 636 aaKnown RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 COL23A1Q86Y22 540 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 BICC1Q9H694 974 aaKnown RBP9.86□□□□□ -0.83
SCARB2-220ENST00000640076 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
SCARB2-220ENST00000640076 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
SCARB2-220ENST00000640076 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms