RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-219ENST00000639811 LAMB2P55268 1798 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 FOXP2O15409 715 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 PHKA1P46020 1223 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
NECAP1-219ENST00000639811 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 GPT2Q8TD30 523 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 MROH5Q6ZUA9 1318 aa11.71□□□□□ -0.53
NECAP1-219ENST00000639811 COL4A1P02462 1669 aa11.71□□□□□ -0.54
NECAP1-219ENST00000639811 SNAP23O00161 211 aa11.71□□□□□ -0.54
NECAP1-219ENST00000639811 STX6O43752 255 aa11.71□□□□□ -0.54
NECAP1-219ENST00000639811 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-219ENST00000639811 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.54
NECAP1-219ENST00000639811 FOXD4L6Q3SYB3 417 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-219ENST00000639811 CCDC102BQ68D86 513 aa11.71□□□□□ -0.54
NECAP1-219ENST00000639811 FOXD4L3Q6VB84 417 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-219ENST00000639811 CNTNAP4Q9C0A0 1308 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 ARAP2Q8WZ64 1704 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
NECAP1-219ENST00000639811 PUM3Q15397 648 aaKnown RBP11.7□□□□□ -0.54
NECAP1-219ENST00000639811 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 LPIN2Q92539 896 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
NECAP1-219ENST00000639811 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
NECAP1-219ENST00000639811 BTAF1O14981 1849 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 RTL9Q8NET4 1388 aa11.7□□□□□ -0.54
NECAP1-219ENST00000639811 ARID4AP29374 1257 aaPredicted RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 Q6ZUG5 572 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 APPBP2Q92624 585 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 NSFL1CQ9UNZ2 370 aaKnown RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 ZNF652Q9Y2D9 606 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 MYH7P12883 1935 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 MYO5AQ9Y4I1 1855 aaKnown RBP11.69□□□□□ -0.54
NECAP1-219ENST00000639811 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
NECAP1-219ENST00000639811 E7EWF7 191 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 STK3Q13188 491 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
NECAP1-219ENST00000639811 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 F13A1P00488 732 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 UQCRFS1P1P0C7P4 283 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 ADD2P35612 726 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 EXOSC10Q01780 885 aaKnown RBP11.68□□□□□ -0.54
NECAP1-219ENST00000639811 DHX32Q7L7V1 743 aaKnown RBP11.68□□□□□ -0.54
NECAP1-219ENST00000639811 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
NECAP1-219ENST00000639811 SLC5A1P13866 664 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 SRP68Q9UHB9 627 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 TCHHQ07283 1943 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 GPAA1O43292 621 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 HMGB1P09429 215 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 MRE11P49959 708 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 BICDL1Q6ZP65 573 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 AMIGO3Q86WK7 504 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 BRF1Q92994 677 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 GTF3C6Q969F1 213 aa11.67□□□□□ -0.54
NECAP1-219ENST00000639811 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 ISY1Q9ULR0 285 aaKnown RBP11.67□□□□□ -0.54
NECAP1-219ENST00000639811 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-219ENST00000639811 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
NECAP1-219ENST00000639811 ATRNO75882 1429 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 FGAP02671 866 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 CHRNDQ07001 517 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 ZSCAN23Q3MJ62 389 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
NECAP1-219ENST00000639811 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 TCRBV5S4A2TA0A5A2 114 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 PDE6AP16499 860 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 ZNF445P59923 1031 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 HAND2P61296 217 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 UBE3CQ15386 1083 aa11.65□□□□□ -0.54
NECAP1-219ENST00000639811 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms