RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 ATRNO75882 1429 aa12.89□□□□□ -0.35
TARDBP-230ENST00000639083 ZPR1O75312 459 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 RPS6KB1P23443 525 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
TARDBP-230ENST00000639083 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
TARDBP-230ENST00000639083 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 ZFYP08048 801 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-230ENST00000639083 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-230ENST00000639083 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
TARDBP-230ENST00000639083 SLC5A1P13866 664 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 KRT32Q14532 448 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 ME3Q16798 604 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 MCTP1Q6DN14 999 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 RGL2O15211 777 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 DTNBO60941 627 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 BRD1O95696 1058 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 ARID4AP29374 1257 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 PUS7LQ9H0K6 701 aaKnown RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
TARDBP-230ENST00000639083 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
TARDBP-230ENST00000639083 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 PHF14O94880 888 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 CHRNDQ07001 517 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 CDC5LQ99459 802 aaKnown RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 LRRC4BQ9NT99 713 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 SPEF2Q9C093 1822 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 SLC9C2Q5TAH2 1124 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 APPBP2Q92624 585 aa12.86□□□□□ -0.35
TARDBP-230ENST00000639083 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.352e-12■□□□□ 8.7
TARDBP-230ENST00000639083 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
TARDBP-230ENST00000639083 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 LRP5O75197 1615 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
TARDBP-230ENST00000639083 BCAMP50895 628 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 ANKRD18AQ8IVF6 992 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
TARDBP-230ENST00000639083 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 FOXP2O15409 715 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 RFC4P35249 363 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 TRAPPC3LQ5T215 181 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
TARDBP-230ENST00000639083 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-230ENST00000639083 PTMSP20962 102 aa12.84□□□□□ -0.35
TARDBP-230ENST00000639083 ADD2P35612 726 aa12.84□□□□□ -0.35
TARDBP-230ENST00000639083 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
TARDBP-230ENST00000639083 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
TARDBP-230ENST00000639083 GPAA1O43292 621 aa12.83□□□□□ -0.35
TARDBP-230ENST00000639083 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.35
TARDBP-230ENST00000639083 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.35
TARDBP-230ENST00000639083 NLRP3Q96P20 1036 aa12.83□□□□□ -0.35
TARDBP-230ENST00000639083 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.35
TARDBP-230ENST00000639083 COL4A1P02462 1669 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 AKAP11Q9UKA4 1901 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 FGAP02671 866 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 GJB2P29033 226 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 Q6ZUG5 572 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 LRRC2Q9BYS8 371 aa12.83□□□□□ -0.36
TARDBP-230ENST00000639083 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 E7EWF7 191 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 SYT1P21579 422 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 MINPP1Q9UNW1 487 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
TARDBP-230ENST00000639083 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
TARDBP-230ENST00000639083 TRIM37O94972 964 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
TARDBP-230ENST00000639083 PDE6AP16499 860 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 STK3Q13188 491 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
TARDBP-230ENST00000639083 FOXD4L6Q3SYB3 417 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-230ENST00000639083 FOXD4L3Q6VB84 417 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-230ENST00000639083 DHX32Q7L7V1 743 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms