RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
SNIP1-204ENST00000638725 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
SNIP1-204ENST00000638725 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.36
SNIP1-204ENST00000638725 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.36
SNIP1-204ENST00000638725 CHST3Q7LGC8 479 aa12.77□□□□□ -0.36
SNIP1-204ENST00000638725 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.36
SNIP1-204ENST00000638725 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.36
SNIP1-204ENST00000638725 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.36
SNIP1-204ENST00000638725 GOLIM4O00461 696 aa12.77□□□□□ -0.37
SNIP1-204ENST00000638725 HMGB1P09429 215 aaKnown RBP12.77□□□□□ -0.37
SNIP1-204ENST00000638725 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-204ENST00000638725 ZNF496Q96IT1 587 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-204ENST00000638725 SALL1Q9NSC2 1324 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
SNIP1-204ENST00000638725 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
SNIP1-204ENST00000638725 KIF18AQ8NI77 898 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 AGXT2Q9BYV1 514 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 PCDHA7Q9UN72 937 aa12.76□□□□□ -0.37
SNIP1-204ENST00000638725 A0A087WZG4 1122 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 A0A1B0GVL5 298 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 E7EWF7 191 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 KDM6AO15550 1401 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-204ENST00000638725 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
SNIP1-204ENST00000638725 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-204ENST00000638725 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
SNIP1-204ENST00000638725 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 PAG1Q9NWQ8 432 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 DSCC1Q9BVC3 393 aa12.75□□□□□ -0.37
SNIP1-204ENST00000638725 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 ELF2Q15723 593 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 ZNF397Q8NF99 534 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 MORC2Q9Y6X9 1032 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 SLIT3O75094 1523 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 ERBB3P21860 1342 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 NDUFA8P51970 172 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 TIMM10P62072 90 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 DPCR1Q3MIW9 517 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 TTLL5Q6EMB2 1281 aa12.74□□□□□ -0.37
SNIP1-204ENST00000638725 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-204ENST00000638725 CASP7P55210 303 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
SNIP1-204ENST00000638725 CLIC4Q9Y696 253 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 ABCC6O95255 1503 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 FER1L4A9Z1Z3 1794 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 MAST3O60307 1309 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 GSDMDP57764 484 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 ADALQ6DHV7 355 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
SNIP1-204ENST00000638725 OSBPL5Q9H0X9 879 aaPredicted RBP12.73□□□□□ -0.37
SNIP1-204ENST00000638725 SMC2O95347 1197 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 E4F1Q66K89 784 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 ZNF274Q96GC6 653 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 RTEL1Q9NZ71 1219 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 NEDD4P46934 1319 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 NPHP1O15259 732 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 PHKG2P15735 406 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 GABPB1Q06547 395 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-204ENST00000638725 ATG9AQ7Z3C6 839 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 LINC00301Q8NCQ3 95 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 IFNKQ9P0W0 207 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
SNIP1-204ENST00000638725 BIN1O00499 593 aa12.71□□□□□ -0.37
SNIP1-204ENST00000638725 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.37
SNIP1-204ENST00000638725 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
SNIP1-204ENST00000638725 STK38Q15208 465 aa12.71□□□□□ -0.37
SNIP1-204ENST00000638725 SF3A1Q15459 793 aaKnown RBP12.71□□□□□ -0.37
SNIP1-204ENST00000638725 KCND1Q9NSA2 647 aa12.71□□□□□ -0.37
SNIP1-204ENST00000638725 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
SNIP1-204ENST00000638725 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.37
SNIP1-204ENST00000638725 M0R2C6 588 aa12.71□□□□□ -0.38
SNIP1-204ENST00000638725 SLFN14P0C7P3 912 aa12.71□□□□□ -0.38
SNIP1-204ENST00000638725 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms