RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 WDR75Q8IWA0 830 aaKnown RBP9.85□□□□□ -0.83
SCARB2-209ENST00000638409 GPATCH11Q8N954 259 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 CRELD1Q96HD1 420 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 GGT7Q9UJ14 662 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 GIGYF1O75420 1035 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-209ENST00000638409 MAP7D1Q3KQU3 841 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 CFHR5Q9BXR6 569 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 TTC21BQ7Z4L5 1316 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
SCARB2-209ENST00000638409 LYPD8Q6UX82 237 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
SCARB2-209ENST00000638409 ABCA3Q99758 1704 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 PIK3C2AO00443 1686 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 ATP2B2Q01814 1243 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 PCDHGA11Q9Y5H2 935 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 WDHD1O75717 1129 aaPredicted RBP9.83□□□□□ -0.84
SCARB2-209ENST00000638409 GNA15P30679 374 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 C12orf49Q9H741 205 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 GNL3LQ9NVN8 582 aaKnown RBP9.83□□□□□ -0.84
SCARB2-209ENST00000638409 RPS6KL1Q9Y6S9 549 aa9.83□□□□□ -0.84
SCARB2-209ENST00000638409 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
SCARB2-209ENST00000638409 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
SCARB2-209ENST00000638409 SNTG2Q9NY99 539 aa9.82□□□□□ -0.84
SCARB2-209ENST00000638409 DOLKQ9UPQ8 538 aa9.82□□□□□ -0.84
SCARB2-209ENST00000638409 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
SCARB2-209ENST00000638409 ZBTB24O43167 697 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-209ENST00000638409 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-209ENST00000638409 USP19O94966 1318 aa9.82□□□□□ -0.84
SCARB2-209ENST00000638409 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 ABTB2Q8N961 1025 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 SH3TC2Q8TF17 1288 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 MPHOSPH6Q99547 160 aaKnown RBP9.81□□□□□ -0.84
SCARB2-209ENST00000638409 LRP6O75581 1613 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
SCARB2-209ENST00000638409 SLIT3O75094 1523 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 CDC45O75419 566 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 ATCAYQ86WG3 371 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
SCARB2-209ENST00000638409 PPP1R12AO14974 1030 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-209ENST00000638409 GALR2O43603 387 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-209ENST00000638409 GYS2P54840 703 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 FAM129BQ96TA1 746 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 KIF4AO95239 1232 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 ETFBP38117 255 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 MEI1Q5TIA1 1274 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 HS2ST1Q7LGA3 356 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 PRPF38AQ8NAV1 312 aaKnown RBP9.8□□□□□ -0.84
SCARB2-209ENST00000638409 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-209ENST00000638409 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-209ENST00000638409 DMRTB1Q96MA1 342 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 TCEAL9Q9UHQ7 104 aa9.8□□□□□ -0.84
SCARB2-209ENST00000638409 ESYT3A0FGR9 886 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 SWT1Q5T5J6 900 aaKnown RBP9.79□□□□□ -0.84
SCARB2-209ENST00000638409 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
SCARB2-209ENST00000638409 PANK3Q9H999 370 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 COPRSQ9NQ92 184 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 F12P00748 615 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-209ENST00000638409 RASA3Q14644 834 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 GPRASP2Q96D09 838 aa9.79□□□□□ -0.84
SCARB2-209ENST00000638409 OVOS2A0A0J9YW53 1432 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 OVOS2Q6IE36 1432 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 JAMLQ86YT9 394 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 CHST12Q9NRB3 414 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 PRKAB1Q9Y478 270 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 NSD3Q9BZ95 1437 aa9.78□□□□□ -0.84
SCARB2-209ENST00000638409 PUS10Q3MIT2 529 aaKnown RBP9.78□□□□□ -0.84
SCARB2-209ENST00000638409 CPDO75976 1380 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 FYB1O15117 783 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 UBE4AQ14139 1066 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 PROX2Q3B8N5 592 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 FAM26DQ5JW98 314 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.84
SCARB2-209ENST00000638409 ADAM32Q8TC27 787 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 IL17RAQ96F46 866 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 DEPDC7Q96QD5 511 aa9.77□□□□□ -0.84
SCARB2-209ENST00000638409 ZBTB39O15060 712 aa9.77□□□□□ -0.85
SCARB2-209ENST00000638409 CDKN1CP49918 316 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-209ENST00000638409 NME9Q86XW9 330 aa9.77□□□□□ -0.85
SCARB2-209ENST00000638409 LILRB2Q8N423 598 aa9.77□□□□□ -0.85
SCARB2-209ENST00000638409 KCNH5Q8NCM2 988 aa9.77□□□□□ -0.85
SCARB2-209ENST00000638409 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-209ENST00000638409 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
SCARB2-209ENST00000638409 NFAT5O94916 1531 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 GCP02774 474 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCARB2-209ENST00000638409 PLCG2P16885 1265 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCARB2-209ENST00000638409 COL14A1Q05707 1796 aaKnown RBP9.76□□□□□ -0.85
SCARB2-209ENST00000638409 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 NSD2O96028 1365 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms