RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 KIF1BPQ96EK5 621 aa23.97■■□□□ 1.43
HLA-A-209ENST00000638375 TNNI3KQ59H18 835 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 LARGE2Q8N3Y3 721 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 ZC3H12CQ9C0D7 883 aaKnown RBP23.96■■□□□ 1.43
HLA-A-209ENST00000638375 IL1RAPL2Q9NP60 686 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 AKAP2Q9Y2D5 859 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 FPGT-TNNI3KV9GXZ4 949 aa23.96■■□□□ 1.43
HLA-A-209ENST00000638375 A0A1B0GUL7 405 aa23.95■■□□□ 1.42
HLA-A-209ENST00000638375 IFIT1P09914 478 aaKnown RBP23.95■■□□□ 1.42
HLA-A-209ENST00000638375 SLC5A1P13866 664 aa23.95■■□□□ 1.42
HLA-A-209ENST00000638375 TIMM10P62072 90 aa23.95■■□□□ 1.42
HLA-A-209ENST00000638375 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
HLA-A-209ENST00000638375 ADORA1P30542 326 aa23.94■■□□□ 1.42
HLA-A-209ENST00000638375 SMC5Q8IY18 1101 aa23.94■■□□□ 1.42
HLA-A-209ENST00000638375 GCC1Q96CN9 775 aa23.94■■□□□ 1.42
HLA-A-209ENST00000638375 SMARCA5O60264 1052 aaPredicted RBP23.93■■□□□ 1.42
HLA-A-209ENST00000638375 GYG1P46976 350 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 DOK7Q18PE1 504 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 EAF2Q96CJ1 260 aaPredicted RBP23.93■■□□□ 1.42
HLA-A-209ENST00000638375 FAM84BQ96KN1 310 aaPredicted RBP23.93■■□□□ 1.42
HLA-A-209ENST00000638375 LRRCC1Q9C099 1032 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 DBNDD1Q9H9R9 158 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 CCDC88AQ3V6T2 1871 aa23.93■■□□□ 1.42
HLA-A-209ENST00000638375 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
HLA-A-209ENST00000638375 ARAP2Q8WZ64 1704 aa23.92■■□□□ 1.42
HLA-A-209ENST00000638375 ECE2O60344 883 aa23.91■■□□□ 1.42
HLA-A-209ENST00000638375 FBXO33Q7Z6M2 555 aa23.91■■□□□ 1.42
HLA-A-209ENST00000638375 XAGE2Q96GT9 111 aa23.91■■□□□ 1.42
HLA-A-209ENST00000638375 NEUROD6Q96NK8 337 aa23.91■■□□□ 1.42
HLA-A-209ENST00000638375 YDJCA8MPS7 323 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 BCAMP50895 628 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 ZNF804AQ7Z570 1209 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 AACSQ86V21 672 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 CLASRPQ8N2M8 674 aaKnown RBP23.9■■□□□ 1.42
HLA-A-209ENST00000638375 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 DBNDD2Q9BQY9 259 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 COA1Q9GZY4 146 aa23.9■■□□□ 1.42
HLA-A-209ENST00000638375 CCDC8Q9H0W5 538 aaPredicted RBP23.9■■□□□ 1.42
HLA-A-209ENST00000638375 TLR7Q9NYK1 1049 aaKnown RBP23.9■■□□□ 1.42
HLA-A-209ENST00000638375 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
HLA-A-209ENST00000638375 HIBADHP31937 336 aaKnown RBP23.89■■□□□ 1.41
HLA-A-209ENST00000638375 CD209Q9NNX6 404 aa23.89■■□□□ 1.41
HLA-A-209ENST00000638375 DBNLQ9UJU6 430 aaKnown RBP23.89■■□□□ 1.41
HLA-A-209ENST00000638375 TIAM2Q8IVF5 1701 aa23.88■■□□□ 1.41
HLA-A-209ENST00000638375 FZD9O00144 591 aa23.88■■□□□ 1.41
HLA-A-209ENST00000638375 CAVIN4Q5BKX8 364 aa23.88■■□□□ 1.41
HLA-A-209ENST00000638375 BCL11AQ9H165 835 aa23.88■■□□□ 1.41
HLA-A-209ENST00000638375 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
HLA-A-209ENST00000638375 G3V3G9 751 aa23.87■■□□□ 1.41
HLA-A-209ENST00000638375 PHKA1P46020 1223 aa23.87■■□□□ 1.41
HLA-A-209ENST00000638375 DCAF8Q5TAQ9 597 aa23.87■■□□□ 1.41
HLA-A-209ENST00000638375 ANKRD45Q5TZF3 282 aa23.87■■□□□ 1.41
HLA-A-209ENST00000638375 KCNQ5Q9NR82 932 aa23.87■■□□□ 1.41
HLA-A-209ENST00000638375 KDM2BQ8NHM5 1336 aa23.86■■□□□ 1.41
HLA-A-209ENST00000638375 IL1R1P14778 569 aa23.86■■□□□ 1.41
HLA-A-209ENST00000638375 CCDC102BQ68D86 513 aa23.86■■□□□ 1.41
HLA-A-209ENST00000638375 B4GALNT3Q6L9W6 998 aa23.86■■□□□ 1.41
HLA-A-209ENST00000638375 PODNQ7Z5L7 613 aa23.86■■□□□ 1.41
HLA-A-209ENST00000638375 TDRD7Q8NHU6 1098 aaKnown RBP23.86■■□□□ 1.41
HLA-A-209ENST00000638375 ZNF541Q9H0D2 1346 aa23.85■■□□□ 1.41
HLA-A-209ENST00000638375 VPS37DQ86XT2 251 aa23.85■■□□□ 1.41
HLA-A-209ENST00000638375 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
HLA-A-209ENST00000638375 PPP4R2Q9NY27 417 aa23.85■■□□□ 1.41
HLA-A-209ENST00000638375 IQSEC3Q9UPP2 1182 aaPredicted RBP23.85■■□□□ 1.41
HLA-A-209ENST00000638375 SCN9AQ15858 1988 aa23.84■■□□□ 1.41
HLA-A-209ENST00000638375 IFIT2P09913 472 aaKnown RBP23.84■■□□□ 1.41
HLA-A-209ENST00000638375 CHD4Q14839 1912 aa23.84■■□□□ 1.41
HLA-A-209ENST00000638375 ZC3H4Q9UPT8 1303 aaKnown RBP23.84■■□□□ 1.41
HLA-A-209ENST00000638375 RAD17O75943 681 aa23.83■■□□□ 1.41
HLA-A-209ENST00000638375 NUCB1Q02818 461 aa23.83■■□□□ 1.41
HLA-A-209ENST00000638375 CXCL9Q07325 125 aa23.83■■□□□ 1.41
HLA-A-209ENST00000638375 GORABQ5T7V8 394 aa23.83■■□□□ 1.41
HLA-A-209ENST00000638375 C16orf71Q8IYS4 520 aaPredicted RBP23.83■■□□□ 1.41
HLA-A-209ENST00000638375 COL1A1P02452 1464 aaPredicted RBP23.82■■□□□ 1.4
HLA-A-209ENST00000638375 EIF6P56537 245 aaKnown RBP23.82■■□□□ 1.4
HLA-A-209ENST00000638375 OTUD7AQ8TE49 926 aaPredicted RBP23.82■■□□□ 1.4
HLA-A-209ENST00000638375 LNPKQ9C0E8 428 aa23.82■■□□□ 1.4
HLA-A-209ENST00000638375 CHD1LQ86WJ1 897 aa23.81■■□□□ 1.4
HLA-A-209ENST00000638375 GNL3LQ9NVN8 582 aaKnown RBP23.81■■□□□ 1.4
HLA-A-209ENST00000638375 PSMD14O00487 310 aa23.8■■□□□ 1.4
HLA-A-209ENST00000638375 ZBTB22O15209 634 aa23.8■■□□□ 1.4
HLA-A-209ENST00000638375 ARID4AP29374 1257 aaPredicted RBP23.8■■□□□ 1.4
HLA-A-209ENST00000638375 CCDC158Q5M9N0 1113 aa23.8■■□□□ 1.4
HLA-A-209ENST00000638375 CIAPIN1Q6FI81 312 aa23.8■■□□□ 1.4
HLA-A-209ENST00000638375 CENPQQ7L2Z9 268 aaPredicted RBP23.8■■□□□ 1.4
HLA-A-209ENST00000638375 ZBTB47Q9UFB7 747 aaPredicted RBP23.8■■□□□ 1.4
HLA-A-209ENST00000638375 JAG2Q9Y219 1238 aa23.8■■□□□ 1.4
HLA-A-209ENST00000638375 USP17L3A6NCW0 530 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 USP17L4A6NCW7 530 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 GTF2IP78347 998 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 SCARF1Q14162 830 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 TTC39AQ5SRH9 613 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 USP17L1Q7RTZ2 530 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 ZNF646O15015 1829 aaPredicted RBP23.79■■□□□ 1.4
HLA-A-209ENST00000638375 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
HLA-A-209ENST00000638375 SALL3Q9BXA9 1300 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms