RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-233ENST00000638031 ANKRD2Q9GZV1 360 aa23.8■■□□□ 1.4
CHRNA7-233ENST00000638031 USP44Q9H0E7 712 aa23.8■■□□□ 1.4
CHRNA7-233ENST00000638031 RBM26Q5T8P6 1007 aaKnown RBP23.79■■□□□ 1.4
CHRNA7-233ENST00000638031 SMC4Q9NTJ3 1288 aa23.79■■□□□ 1.4
CHRNA7-233ENST00000638031 TRPM7Q96QT4 1865 aa23.79■■□□□ 1.4
CHRNA7-233ENST00000638031 ANKRD44Q8N8A2 993 aa23.78■■□□□ 1.4
CHRNA7-233ENST00000638031 PUS3Q9BZE2 481 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-233ENST00000638031 USP17L3A6NCW0 530 aa23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 USP17L4A6NCW7 530 aa23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 USP17L1Q7RTZ2 530 aa23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 BICC1Q9H694 974 aaKnown RBP23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 ABT1Q9ULW3 272 aaKnown RBP23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 NOB1Q9ULX3 412 aaKnown RBP23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 ASTN2O75129 1339 aaPredicted RBP23.77■■□□□ 1.4
CHRNA7-233ENST00000638031 CT47B1P0C2W7 299 aaPredicted RBP23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 ZNF280AP59817 542 aaPredicted RBP23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 CCDC57Q2TAC2 916 aa23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 RABL6Q3YEC7 729 aaPredicted RBP23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 DACT2Q5SW24 774 aa23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 AGBL3Q8NEM8 1001 aa23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 COA1Q9GZY4 146 aa23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 ZNF609O15014 1411 aa23.76■■□□□ 1.39
CHRNA7-233ENST00000638031 RARSP54136 660 aaKnown RBP23.75■■□□□ 1.39
CHRNA7-233ENST00000638031 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-233ENST00000638031 LDHAL6AQ6ZMR3 332 aa23.75■■□□□ 1.39
CHRNA7-233ENST00000638031 USP48Q86UV5 1035 aa23.75■■□□□ 1.39
CHRNA7-233ENST00000638031 ZNF646O15015 1829 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-233ENST00000638031 WDR33Q9C0J8 1336 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-233ENST00000638031 PSME4Q14997 1843 aa23.73■■□□□ 1.39
CHRNA7-233ENST00000638031 FOXN1O15353 648 aa23.73■■□□□ 1.39
CHRNA7-233ENST00000638031 C15orf52Q6ZUT6 534 aaKnown RBP23.73■■□□□ 1.39
CHRNA7-233ENST00000638031 CDC37L1Q7L3B6 337 aa23.73■■□□□ 1.39
CHRNA7-233ENST00000638031 TLL2Q9Y6L7 1015 aa23.73■■□□□ 1.39
CHRNA7-233ENST00000638031 PLIN1O60240 522 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 KIF4BQ2VIQ3 1234 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 STRIP1Q5VSL9 837 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 CD209Q9NNX6 404 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 WBP1LQ9NX94 342 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 RIPOR2Q9Y4F9 1068 aa23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 POLR2AP24928 1970 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-233ENST00000638031 CELF2O95319 508 aaKnown RBP23.71■■□□□ 1.39
CHRNA7-233ENST00000638031 USP17L8P0C7I0 530 aa23.71■■□□□ 1.39
CHRNA7-233ENST00000638031 CNNM1Q9NRU3 951 aa23.71■■□□□ 1.39
CHRNA7-233ENST00000638031 A0A1B0GUL6 1792 aa23.7■■□□□ 1.39
CHRNA7-233ENST00000638031 KCNJ4P48050 445 aa23.7■■□□□ 1.38
CHRNA7-233ENST00000638031 SCARF1Q14162 830 aa23.7■■□□□ 1.38
CHRNA7-233ENST00000638031 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
CHRNA7-233ENST00000638031 KLHDC4Q8TBB5 520 aa23.7■■□□□ 1.38
CHRNA7-233ENST00000638031 ADM5C9JUS6 153 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 GTF2IP78347 998 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 LRRC24Q50LG9 513 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 TTLL5Q6EMB2 1281 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 CYP4F22Q6NT55 531 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 SAPCD2Q86UD0 394 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 MYOZ2Q9NPC6 264 aa23.69■■□□□ 1.38
CHRNA7-233ENST00000638031 KRT26Q7Z3Y9 468 aa23.68■■□□□ 1.38
CHRNA7-233ENST00000638031 CERS5Q8N5B7 392 aa23.68■■□□□ 1.38
CHRNA7-233ENST00000638031 FBXW7Q969H0 707 aa23.68■■□□□ 1.38
CHRNA7-233ENST00000638031 CAPNS2Q96L46 248 aa23.68■■□□□ 1.38
CHRNA7-233ENST00000638031 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
CHRNA7-233ENST00000638031 IL1R1P14778 569 aa23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 RFX5P48382 616 aaPredicted RBP23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 TNS4Q8IZW8 715 aa23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 ZNF408Q9H9D4 720 aa23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 GGA3Q9NZ52 723 aa23.67■■□□□ 1.38
CHRNA7-233ENST00000638031 BCAR3O75815 825 aa23.66■■□□□ 1.38
CHRNA7-233ENST00000638031 NBPF9Q3BBW0 867 aa23.66■■□□□ 1.38
CHRNA7-233ENST00000638031 DCPSQ96C86 337 aaKnown RBP23.66■■□□□ 1.38
CHRNA7-233ENST00000638031 SCAF8Q9UPN6 1271 aaKnown RBP23.66■■□□□ 1.38
CHRNA7-233ENST00000638031 ECE1P42892 770 aa23.65■■□□□ 1.38
CHRNA7-233ENST00000638031 ANGEL2Q5VTE6 544 aaKnown RBP23.65■■□□□ 1.38
CHRNA7-233ENST00000638031 PAXIP1Q6ZW49 1069 aaPredicted RBP23.65■■□□□ 1.38
CHRNA7-233ENST00000638031 API5Q9BZZ5 524 aaKnown RBP23.65■■□□□ 1.38
CHRNA7-233ENST00000638031 UBE4AQ14139 1066 aa23.64■■□□□ 1.37
CHRNA7-233ENST00000638031 VGLL2Q8N8G2 317 aa23.64■■□□□ 1.37
CHRNA7-233ENST00000638031 AIDAQ96BJ3 306 aa23.64■■□□□ 1.37
CHRNA7-233ENST00000638031 FAM84BQ96KN1 310 aaPredicted RBP23.64■■□□□ 1.37
CHRNA7-233ENST00000638031 GYG1P46976 350 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 MAP2K1Q02750 393 aaPredicted RBP23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 GRM1Q13255 1194 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 KIAA0825Q8IV33 1275 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 HHIPL1Q96JK4 782 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 JAG2Q9Y219 1238 aa23.63■■□□□ 1.37
CHRNA7-233ENST00000638031 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 WNT10BO00744 389 aa23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 AOC2O75106 756 aa23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 PTPN12Q05209 780 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 ZBED3Q96IU2 234 aaPredicted RBP23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 MEIS3Q99687 375 aa23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 PRDM10Q9NQV6 1147 aa23.62■■□□□ 1.37
CHRNA7-233ENST00000638031 MROH5Q6ZUA9 1318 aa23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 MYO3BQ8WXR4 1341 aa23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 INTS3Q68E01 1043 aaKnown RBP23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 ZNF804AQ7Z570 1209 aa23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 TDRD7Q8NHU6 1098 aaKnown RBP23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 PCDHAC2Q9Y5I4 1007 aa23.61■■□□□ 1.37
CHRNA7-233ENST00000638031 LBX1P52954 281 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms