RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SSH1Q8WYL5 1049 aa10□□□□□ -0.81
PNKP-229ENST00000637897 SUCLG2Q96I99 432 aa10□□□□□ -0.81
PNKP-229ENST00000637897 CDC5LQ99459 802 aaKnown RBP10□□□□□ -0.81
PNKP-229ENST00000637897 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
PNKP-229ENST00000637897 UTYO14607 1347 aa10□□□□□ -0.81
PNKP-229ENST00000637897 AOX1Q06278 1338 aa10□□□□□ -0.81
PNKP-229ENST00000637897 GRM8O00222 908 aa9.99□□□□□ -0.81
PNKP-229ENST00000637897 HSP90B1P14625 803 aaKnown RBP9.99□□□□□ -0.81
PNKP-229ENST00000637897 RPS12P25398 132 aaKnown RBP9.99□□□□□ -0.81
PNKP-229ENST00000637897 CHRNDQ07001 517 aa9.99□□□□□ -0.81
PNKP-229ENST00000637897 LMBR1LQ6UX01 489 aa9.99□□□□□ -0.81
PNKP-229ENST00000637897 CERS5Q8N5B7 392 aa9.99□□□□□ -0.81
PNKP-229ENST00000637897 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
PNKP-229ENST00000637897 PUS3Q9BZE2 481 aaKnown RBP9.99□□□□□ -0.81
PNKP-229ENST00000637897 H7C1D1 291 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 HSPA8P11142 646 aaKnown RBP9.98□□□□□ -0.81
PNKP-229ENST00000637897 KIF4BQ2VIQ3 1234 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 CDC37L1Q7L3B6 337 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 ANKRD44Q8N8A2 993 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 AGBL3Q8NEM8 1001 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 ZBED3Q96IU2 234 aaPredicted RBP9.98□□□□□ -0.81
PNKP-229ENST00000637897 CAPNS2Q96L46 248 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 ABT1Q9ULW3 272 aaKnown RBP9.98□□□□□ -0.81
PNKP-229ENST00000637897 PCDHAC2Q9Y5I4 1007 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 ZNF804BA4D1E1 1349 aa9.98□□□□□ -0.81
PNKP-229ENST00000637897 USP17L3A6NCW0 530 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 USP17L4A6NCW7 530 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 FAM155AB1AL88 458 aaPredicted RBP9.97□□□□□ -0.81
PNKP-229ENST00000637897 ALDH1L1O75891 902 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 SCARF1Q14162 830 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 NBPF9Q3BBW0 867 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 C15orf52Q6ZUT6 534 aaKnown RBP9.97□□□□□ -0.81
PNKP-229ENST00000637897 USP17L1Q7RTZ2 530 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 GGA3Q9NZ52 723 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 LEMD3Q9Y2U8 911 aa9.97□□□□□ -0.81
PNKP-229ENST00000637897 ANKRD18BA2A2Z9 1011 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 E9PSI1 815 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 IGHMBP2P38935 993 aaKnown RBP9.96□□□□□ -0.82
PNKP-229ENST00000637897 LBX1P52954 281 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
PNKP-229ENST00000637897 PRAMEF18Q5VWM3 479 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 KRT26Q7Z3Y9 468 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 COA1Q9GZY4 146 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 ZNF408Q9H9D4 720 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 CD209Q9NNX6 404 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 MYOZ2Q9NPC6 264 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
PNKP-229ENST00000637897 WNT10BO00744 389 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 USP17L8P0C7I0 530 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
PNKP-229ENST00000637897 GRIK5Q16478 980 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 STRIP1Q5VSL9 837 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 ANGEL2Q5VTE6 544 aaKnown RBP9.95□□□□□ -0.82
PNKP-229ENST00000637897 MOB2Q70IA6 237 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 CDCA5Q96FF9 252 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 HHIPL1Q96JK4 782 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 BICC1Q9H694 974 aaKnown RBP9.95□□□□□ -0.82
PNKP-229ENST00000637897 TSKSQ9UJT2 592 aa9.95□□□□□ -0.82
PNKP-229ENST00000637897 IL1R1P14778 569 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 GTF2IP78347 998 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
PNKP-229ENST00000637897 LRRC24Q50LG9 513 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 TTLL5Q6EMB2 1281 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 MPHOSPH8Q99549 860 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 PRDM10Q9NQV6 1147 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 TNNQ9UQP3 1299 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 JAG2Q9Y219 1238 aa9.94□□□□□ -0.82
PNKP-229ENST00000637897 SASH1O94885 1247 aa9.93□□□□□ -0.82
PNKP-229ENST00000637897 GRM1Q13255 1194 aa9.93□□□□□ -0.82
PNKP-229ENST00000637897 KIAA0825Q8IV33 1275 aa9.93□□□□□ -0.82
PNKP-229ENST00000637897 FAM84BQ96KN1 310 aaPredicted RBP9.93□□□□□ -0.82
PNKP-229ENST00000637897 GBA2Q9HCG7 927 aaPredicted RBP9.93□□□□□ -0.82
PNKP-229ENST00000637897 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 PTPRCP08575 1304 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 MAP2K2P36507 400 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 CTCFP49711 727 aaPredicted RBP9.92□□□□□ -0.82
PNKP-229ENST00000637897 BRPF1P55201 1214 aaPredicted RBP9.92□□□□□ -0.82
PNKP-229ENST00000637897 HUNKP57058 714 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 LDHAL6AQ6ZMR3 332 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 TDRD7Q8NHU6 1098 aaKnown RBP9.92□□□□□ -0.82
PNKP-229ENST00000637897 DCPSQ96C86 337 aaKnown RBP9.92□□□□□ -0.82
PNKP-229ENST00000637897 C9orf78Q9NZ63 289 aaPredicted RBP9.92□□□□□ -0.82
PNKP-229ENST00000637897 FZD1Q9UP38 647 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
PNKP-229ENST00000637897 PITPNM2Q9BZ72 1349 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 G3V3G9 751 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 PLIN1O60240 522 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 GYG1P46976 350 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 HNRNPUQ00839 825 aaKnown RBP eCLIP9.91□□□□□ -0.82
PNKP-229ENST00000637897 MAP2K1Q02750 393 aaPredicted RBP9.91□□□□□ -0.82
PNKP-229ENST00000637897 CCDC57Q2TAC2 916 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 ALDH1L2Q3SY69 923 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms