RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-223ENST00000637671 ALDH1A1P00352 501 aa15.17■□□□□ 0.02
SYNGAP1-223ENST00000637671 APOBEC3FQ8IUX4 373 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-223ENST00000637671 CFHR5Q9BXR6 569 aa15.17■□□□□ 0.02
SYNGAP1-223ENST00000637671 PSME4Q14997 1843 aa15.17■□□□□ 0.02
SYNGAP1-223ENST00000637671 WNT10BO00744 389 aa15.16■□□□□ 0.02
SYNGAP1-223ENST00000637671 CTSWP56202 376 aa15.16■□□□□ 0.02
SYNGAP1-223ENST00000637671 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
SYNGAP1-223ENST00000637671 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
SYNGAP1-223ENST00000637671 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
SYNGAP1-223ENST00000637671 SASH1O94885 1247 aa15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 PRKG1Q13976 671 aa15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 JARID2Q92833 1246 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 CHMP4AQ9BY43 222 aa15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 COA1Q9GZY4 146 aa15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-223ENST00000637671 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-223ENST00000637671 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
SYNGAP1-223ENST00000637671 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-223ENST00000637671 METTL22Q9BUU2 404 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-223ENST00000637671 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-223ENST00000637671 HTTP42858 3142 aa15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 MANSC4A6NHS7 340 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 INHBEP58166 350 aa15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-223ENST00000637671 MKI67P46013 3256 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-223ENST00000637671 LDLRAD1Q5T700 205 aa15.12■□□□□ 0.01
SYNGAP1-223ENST00000637671 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
SYNGAP1-223ENST00000637671 IFT57Q9NWB7 429 aa15.12■□□□□ 0.01
SYNGAP1-223ENST00000637671 LEMD3Q9Y2U8 911 aa15.12■□□□□ 0.01
SYNGAP1-223ENST00000637671 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 GNAI1P63096 354 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 KIAA0825Q8IV33 1275 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 TTLL11Q8NHH1 800 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 SLC10A4Q96EP9 437 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 R3HDMLQ9H3Y0 253 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 GREM2Q9H772 168 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
SYNGAP1-223ENST00000637671 WTIPA6NIX2 430 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 PPP1R12BO60237 982 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 ZNF853P0CG23 659 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 ZBTB48P10074 688 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 KCNJ4P48050 445 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 HABP4Q5JVS0 413 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 DEFB129Q9H1M3 183 aa15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-223ENST00000637671 DLGAP5Q15398 846 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 PPP2R3BQ9Y5P8 575 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
SYNGAP1-223ENST00000637671 MYO1BO43795 1136 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 GTF2IP78347 998 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 KSR2Q6VAB6 950 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 WNK4Q96J92 1243 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 CENPFP49454 3210 aa15.08■□□□□ 0
SYNGAP1-223ENST00000637671 POTEFA5A3E0 1075 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 UNCXA6NJT0 531 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 IGKV5-2P06315 115 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 MAP3K11Q16584 847 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 SUPT20HL1Q3ZLR7 823 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
SYNGAP1-223ENST00000637671 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
SYNGAP1-223ENST00000637671 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 IGF2BP3O00425 579 aaKnown RBP eCLIP15.06■□□□□ 0
SYNGAP1-223ENST00000637671 IREB2P48200 963 aaKnown RBP15.06■□□□□ 0
SYNGAP1-223ENST00000637671 UBE3BQ7Z3V4 1068 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 STK31Q9BXU1 1019 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 FZD1Q9UP38 647 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 PTPN22Q9Y2R2 807 aa15.06■□□□□ 0
SYNGAP1-223ENST00000637671 KLRK1P26718 216 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 ARMC5Q96C12 935 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 CLMNQ96JQ2 1002 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 EFCC1Q9HA90 598 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 SPEF2Q9C093 1822 aa15.05■□□□□ -0
SYNGAP1-223ENST00000637671 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
SYNGAP1-223ENST00000637671 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 ITGA6P23229 1130 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 CRHR2Q13324 411 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 ARHGEF6Q15052 776 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 CWF19L2Q2TBE0 894 aaKnown RBP15.04■□□□□ -0
SYNGAP1-223ENST00000637671 MTMR14Q8NCE2 650 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms