RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TMTC2Q8N394 836 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 SSH3Q8TE77 659 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 MKNK2Q9HBH9 465 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 GOLGA6L3A6NEY3 463 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 LETM1O95202 739 aaPredicted RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 IKQ13123 557 aaPredicted RBP6.5□□□□□ -1.37
CHD2-227ENST00000637572 DSG2Q14126 1118 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 MCMDC2Q4G0Z9 681 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 LPIN2Q92539 896 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 FAM89AQ96GI7 184 aa6.5□□□□□ -1.37
CHD2-227ENST00000637572 SDSP20132 328 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 PIP4K2AP48426 406 aaPredicted RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 TRAF1Q13077 416 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 ZNF444Q8N0Y2 327 aaPredicted RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 PAG1Q9NWQ8 432 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 MAST3O60307 1309 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 IRF6O14896 467 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 CRKLP46109 303 aaKnown RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 SLC27A3Q5K4L6 730 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 CRACR2BQ8N4Y2 399 aaPredicted RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 PROCA1Q8NCQ7 364 aaPredicted RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 KCNQ3O43525 872 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 CASTP20810 708 aaKnown RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 OGFOD1Q8N543 542 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 BICD2Q8TD16 824 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 PIGBQ92521 554 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 KRT23Q9C075 422 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 CRISPLD2Q9H0B8 497 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 USP44Q9H0E7 712 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 GPR108Q9NPR9 543 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 ASAP1Q9ULH1 1129 aa6.49□□□□□ -1.37
CHD2-227ENST00000637572 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
CHD2-227ENST00000637572 H0YIN7 160 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 KCNQ2O43526 872 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 MCM6Q14566 821 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 DRC7Q8IY82 874 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 MS4A4AQ96JQ5 239 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 HELLSQ9NRZ9 838 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 PALLDQ8WX93 1383 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 SSH2Q76I76 1423 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 TPM2P07951 284 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 TXLNAP40222 546 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 CTSWP56202 376 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 NAA16Q6N069 864 aaPredicted RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 NCOA7Q8NI08 942 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 SUCLG2Q96I99 432 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 LIMCH1Q9UPQ0 1083 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 KIF1AQ12756 1690 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 LRRC7Q96NW7 1537 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 RNF113AO15541 343 aaKnown RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 CIAO1O76071 339 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 TFCP2Q12800 502 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 MAP2K5Q13163 448 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 CTCFLQ8NI51 663 aaPredicted RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 WDR66Q8TBY9 1149 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 TBC1D22AQ8WUA7 517 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 JDP2Q8WYK2 163 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 ESYT1Q9BSJ8 1104 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 GDPD2Q9HCC8 539 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 CFAP45Q9UL16 551 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 CACNA1GO43497 2377 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 CD163L1Q9NR16 1453 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 WDHD1O75717 1129 aaPredicted RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 KIF5BP33176 963 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 ZNF579Q8NAF0 562 aaKnown RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 ANKRD20A12PQ8NF67 263 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 PHF12Q96QT6 1004 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
CHD2-227ENST00000637572 NSFL1CQ9UNZ2 370 aaKnown RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 PA2G4Q9UQ80 394 aaKnown RBP6.48□□□□□ -1.37
CHD2-227ENST00000637572 ADGRB2O60241 1585 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 TPM3P06753 285 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 LARP1BQ659C4 914 aaKnown RBP6.47□□□□□ -1.37
CHD2-227ENST00000637572 MFSD6Q6ZSS7 791 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 JARID2Q92833 1246 aaPredicted RBP6.47□□□□□ -1.37
CHD2-227ENST00000637572 SPATA31A1Q5TZJ5 1347 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 A0A1B0GUL7 405 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 MINDY4BA8MYZ0 360 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 GOLGA6L19H0YKK7 550 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 RPS6KA4O75676 772 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 CYP7A1P22680 504 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 RPS8P62241 208 aaKnown RBP6.47□□□□□ -1.37
CHD2-227ENST00000637572 KRT85P78386 507 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 TMED8Q6PL24 325 aaPredicted RBP6.47□□□□□ -1.37
CHD2-227ENST00000637572 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 NEK1Q96PY6 1258 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 BCS1LQ9Y276 419 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 BECN2A8MW95 431 aa6.47□□□□□ -1.37
CHD2-227ENST00000637572 HIBADHP31937 336 aaKnown RBP6.47□□□□□ -1.37
CHD2-227ENST00000637572 MCM5P33992 734 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms