RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 RUFY2Q8WXA3 655 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 RBM17Q96I25 401 aaKnown RBP18.61■□□□□ 0.57
CLN6-219ENST00000637329 C22orf23Q9BZE7 217 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 DIAPH3Q9NSV4 1193 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 MINPP1Q9UNW1 487 aa18.61■□□□□ 0.57
CLN6-219ENST00000637329 HSPA6P17066 643 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 PDE6BP35913 854 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 CRAMP1Q96RY5 1269 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 PAG1Q9NWQ8 432 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 TAF1P21675 1872 aa18.6■□□□□ 0.57
CLN6-219ENST00000637329 LRRFIP1Q32MZ4 808 aaKnown RBP18.59■□□□□ 0.57
CLN6-219ENST00000637329 KBTBD3Q8NAB2 608 aa18.59■□□□□ 0.57
CLN6-219ENST00000637329 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
CLN6-219ENST00000637329 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
CLN6-219ENST00000637329 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.57
CLN6-219ENST00000637329 ZBTB22O15209 634 aa18.58■□□□□ 0.56
CLN6-219ENST00000637329 SGSM2O43147 1006 aa18.58■□□□□ 0.56
CLN6-219ENST00000637329 CCDC102BQ68D86 513 aa18.58■□□□□ 0.56
CLN6-219ENST00000637329 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
CLN6-219ENST00000637329 GPBP1L1Q9HC44 474 aaPredicted RBP18.58■□□□□ 0.56
CLN6-219ENST00000637329 TAF5LO75529 589 aa18.57■□□□□ 0.56
CLN6-219ENST00000637329 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
CLN6-219ENST00000637329 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
CLN6-219ENST00000637329 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
CLN6-219ENST00000637329 AKAP11Q9UKA4 1901 aa18.57■□□□□ 0.56
CLN6-219ENST00000637329 DOCK2Q92608 1830 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 DUOX1Q9NRD9 1551 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 XDHP47989 1333 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 BBOX1O75936 387 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 NPR1P16066 1061 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
CLN6-219ENST00000637329 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
CLN6-219ENST00000637329 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
CLN6-219ENST00000637329 GOLIM4O00461 696 aa18.55■□□□□ 0.56
CLN6-219ENST00000637329 USP26Q9BXU7 913 aa18.55■□□□□ 0.56
CLN6-219ENST00000637329 DLEC1Q9Y238 1755 aa18.55■□□□□ 0.56
CLN6-219ENST00000637329 PDS5AQ29RF7 1337 aaKnown RBP18.54■□□□□ 0.56
CLN6-219ENST00000637329 ZFYP08048 801 aaPredicted RBP18.54■□□□□ 0.56
CLN6-219ENST00000637329 SRGNP10124 158 aa18.54■□□□□ 0.56
CLN6-219ENST00000637329 MCAMP43121 646 aa18.54■□□□□ 0.56
CLN6-219ENST00000637329 PHKA1P46020 1223 aa18.54■□□□□ 0.56
CLN6-219ENST00000637329 KCNJ4P48050 445 aa18.54■□□□□ 0.56
CLN6-219ENST00000637329 GNL3LQ9NVN8 582 aaKnown RBP18.54■□□□□ 0.56
CLN6-219ENST00000637329 LEMD3Q9Y2U8 911 aa18.54■□□□□ 0.56
CLN6-219ENST00000637329 GOLGB1Q14789 3259 aaKnown RBP18.53■□□□□ 0.56
CLN6-219ENST00000637329 SEMA3EO15041 775 aa18.53■□□□□ 0.56
CLN6-219ENST00000637329 MCCP23508 829 aa18.53■□□□□ 0.56
CLN6-219ENST00000637329 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
CLN6-219ENST00000637329 CWC27Q6UX04 472 aaKnown RBP18.53■□□□□ 0.56
CLN6-219ENST00000637329 EDC3Q96F86 508 aaKnown RBP18.53■□□□□ 0.56
CLN6-219ENST00000637329 ANO2Q9NQ90 1003 aa18.53■□□□□ 0.56
CLN6-219ENST00000637329 MYH7P12883 1935 aa18.53■□□□□ 0.56
CLN6-219ENST00000637329 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
CLN6-219ENST00000637329 ALDH1B1P30837 517 aa18.52■□□□□ 0.56
CLN6-219ENST00000637329 ZAP70P43403 619 aa18.52■□□□□ 0.56
CLN6-219ENST00000637329 NMIQ13287 307 aaPredicted RBP18.52■□□□□ 0.56
CLN6-219ENST00000637329 SCARF1Q14162 830 aa18.52■□□□□ 0.56
CLN6-219ENST00000637329 C15orf52Q6ZUT6 534 aaKnown RBP18.52■□□□□ 0.56
CLN6-219ENST00000637329 MASTLQ96GX5 879 aa18.52■□□□□ 0.56
CLN6-219ENST00000637329 PODXL2Q9NZ53 605 aa18.52■□□□□ 0.56
CLN6-219ENST00000637329 IRS2Q9Y4H2 1338 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLN6-219ENST00000637329 RASGRF1Q13972 1273 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 STYK1Q6J9G0 422 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 ZSCAN25Q6NSZ9 544 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 SPATA5Q8NB90 893 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
CLN6-219ENST00000637329 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLN6-219ENST00000637329 NDUFB9Q9Y6M9 179 aa18.51■□□□□ 0.55
CLN6-219ENST00000637329 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 A0A0D9SFI3 127 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 SNAP23O00161 211 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 ANAPC15P60006 121 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 IL17RAQ96F46 866 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 IL25Q9H293 177 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 HMG20BQ9P0W2 317 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 ANKIB1Q9P2G1 1089 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
CLN6-219ENST00000637329 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
CLN6-219ENST00000637329 ATP2B4P23634 1241 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 FBXO33Q7Z6M2 555 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 FAM227BQ96M60 508 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 LSG1Q9H089 658 aaKnown RBP18.49■□□□□ 0.55
CLN6-219ENST00000637329 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
CLN6-219ENST00000637329 COL1A1P02452 1464 aaPredicted RBP18.48■□□□□ 0.55
CLN6-219ENST00000637329 H0YIN7 160 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 IGSF3O75054 1194 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 CYP2E1P05181 493 aaPredicted RBP18.48■□□□□ 0.55
CLN6-219ENST00000637329 BCAMP50895 628 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
CLN6-219ENST00000637329 VPS37DQ86XT2 251 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms