RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 PDE3BQ13370 1112 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 RNF187Q5TA31 235 aaPredicted RBP9.25□□□□□ -0.93
CLN5-217ENST00000637278 MON2Q7Z3U7 1717 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 RIC3Q7Z5B4 369 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
CLN5-217ENST00000637278 A0A0G2JS52 829 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 NAT2P11245 290 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 CDKN1CP49918 316 aaPredicted RBP9.24□□□□□ -0.93
CLN5-217ENST00000637278 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
CLN5-217ENST00000637278 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 RREB1Q92766 1687 aa9.24□□□□□ -0.93
CLN5-217ENST00000637278 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 C21orf62-AS1Q17RA5 79 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
CLN5-217ENST00000637278 HMGN5P82970 282 aaKnown RBP9.23□□□□□ -0.93
CLN5-217ENST00000637278 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLN5-217ENST00000637278 FAM98CQ17RN3 349 aaKnown RBP9.23□□□□□ -0.93
CLN5-217ENST00000637278 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 EFCC1Q9HA90 598 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 AS3MTQ9HBK9 375 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 AATKQ6ZMQ8 1374 aa9.23□□□□□ -0.93
CLN5-217ENST00000637278 EXOC5O00471 708 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 GNALP38405 381 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 FAM196AQ6ZSG2 479 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 MTERF4Q7Z6M4 381 aaKnown RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 C14orf80Q86SX3 495 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 ABTB2Q8N961 1025 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 SUDS3Q9H7L9 328 aaPredicted RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 COL5A2P05997 1499 aaPredicted RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 CRB1P82279 1406 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 IGHDP01880 384 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 RIPK4P57078 832 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 CACTIN-AS1Q8N1I8 211 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 INO80BQ9C086 356 aaPredicted RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 KIF16BQ96L93 1317 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 CAMTA1Q9Y6Y1 1673 aa9.22□□□□□ -0.93
CLN5-217ENST00000637278 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 RNPC3Q96LT9 517 aaKnown RBP9.22□□□□□ -0.93
CLN5-217ENST00000637278 IPO7O95373 1038 aaKnown RBP9.21□□□□□ -0.93
CLN5-217ENST00000637278 GUCA2AQ02747 115 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 E2F5Q15329 346 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 GLYCTKQ8IVS8 523 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 PDILTQ8N807 584 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 KCNH5Q8NCM2 988 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 PAGR1Q9BTK6 254 aa9.21□□□□□ -0.93
CLN5-217ENST00000637278 NINLQ9Y2I6 1382 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 F6X3S4 739 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 HCLS1P14317 486 aaPredicted RBP9.21□□□□□ -0.94
CLN5-217ENST00000637278 MAPK8P45983 427 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 GTF2A1P52655 376 aaPredicted RBP9.21□□□□□ -0.94
CLN5-217ENST00000637278 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.21□□□□□ -0.94
CLN5-217ENST00000637278 COL18A1P39060 1754 aa9.21□□□□□ -0.94
CLN5-217ENST00000637278 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 FAM221BA6H8Z2 402 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 K7ELQ4 463 aaPredicted RBP9.2□□□□□ -0.94
CLN5-217ENST00000637278 SKILP12757 684 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 DONSONQ9NYP3 566 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 CEP126Q9P2H0 1117 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
CLN5-217ENST00000637278 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
CLN5-217ENST00000637278 ZRANB2O95218 330 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLN5-217ENST00000637278 TPM3P06753 285 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 UBE4AQ14139 1066 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 LRCH2Q5VUJ6 765 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 NOL10Q9BSC4 688 aaKnown RBP9.2□□□□□ -0.94
CLN5-217ENST00000637278 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
CLN5-217ENST00000637278 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 BCL9O00512 1426 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 ESPNB1AK53 854 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 ECEL1O95672 775 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 ABCD1P33897 745 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 TNNT3P45378 269 aaPredicted RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 CC2D1AQ6P1N0 951 aaPredicted RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 METTL3Q86U44 580 aaKnown RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 HSCBQ8IWL3 235 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 SUGP1Q8IWZ8 645 aaKnown RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 PARP2Q9UGN5 583 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 ISY1Q9ULR0 285 aaKnown RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 USP17L3A6NCW0 530 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 USP17L4A6NCW7 530 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms