RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IL15P40933 162 aaPredicted RBP21.34■■□□□ 1.01
CLN6-218ENST00000637223 NIM1KQ8IY84 436 aa21.34■■□□□ 1.01
CLN6-218ENST00000637223 JDP2Q8WYK2 163 aa21.34■■□□□ 1.01
CLN6-218ENST00000637223 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
CLN6-218ENST00000637223 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
CLN6-218ENST00000637223 G3BP1Q13283 466 aaKnown RBP eCLIP21.33■■□□□ 1.01
CLN6-218ENST00000637223 DOK7Q18PE1 504 aa21.33■■□□□ 1.01
CLN6-218ENST00000637223 VGLL2Q8N8G2 317 aa21.33■■□□□ 1.01
CLN6-218ENST00000637223 HMMRO75330 724 aa21.32■■□□□ 1
CLN6-218ENST00000637223 PDE8BO95263 885 aa21.32■■□□□ 1
CLN6-218ENST00000637223 OS9Q13438 667 aaPredicted RBP21.32■■□□□ 1
CLN6-218ENST00000637223 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
CLN6-218ENST00000637223 DBNDD1Q9H9R9 158 aa21.32■■□□□ 1
CLN6-218ENST00000637223 CEP126Q9P2H0 1117 aa21.32■■□□□ 1
CLN6-218ENST00000637223 MED23Q9ULK4 1368 aa21.32■■□□□ 1
CLN6-218ENST00000637223 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
CLN6-218ENST00000637223 G3V3G9 751 aa21.3■■□□□ 1
CLN6-218ENST00000637223 TFCP2Q12800 502 aa21.3■■□□□ 1
CLN6-218ENST00000637223 UBE4AQ14139 1066 aa21.3■■□□□ 1
CLN6-218ENST00000637223 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
CLN6-218ENST00000637223 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
CLN6-218ENST00000637223 FZD9O00144 591 aa21.29■■□□□ 1
CLN6-218ENST00000637223 ECE2O60344 883 aa21.29■■□□□ 1
CLN6-218ENST00000637223 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
CLN6-218ENST00000637223 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
CLN6-218ENST00000637223 NOP58Q9Y2X3 529 aaKnown RBP21.29■■□□□ 1
CLN6-218ENST00000637223 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
CLN6-218ENST00000637223 IRS2Q9Y4H2 1338 aa21.29■■□□□ 1
CLN6-218ENST00000637223 SASH1O94885 1247 aa21.28■■□□□ 1
CLN6-218ENST00000637223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.28■■□□□ 1
CLN6-218ENST00000637223 A0A1B0GUL6 1792 aa21.28■■□□□ 1
CLN6-218ENST00000637223 TIAM2Q8IVF5 1701 aa21.27■■□□□ 1
CLN6-218ENST00000637223 YDJCA8MPS7 323 aa21.27■■□□□ 1
CLN6-218ENST00000637223 FGFR2P21802 821 aa21.27■■□□□ 1
CLN6-218ENST00000637223 EIF6P56537 245 aaKnown RBP21.27■■□□□ 1
CLN6-218ENST00000637223 ATP2B3Q16720 1220 aa21.27■■□□□ 1
CLN6-218ENST00000637223 C15orf52Q6ZUT6 534 aaKnown RBP21.27■■□□□ 1
CLN6-218ENST00000637223 MKRN1Q9UHC7 482 aaKnown RBP21.27■■□□□ 1
CLN6-218ENST00000637223 POTECB2RU33 542 aa21.26■□□□□ 0.99
CLN6-218ENST00000637223 IFIT1P09914 478 aaKnown RBP21.26■□□□□ 0.99
CLN6-218ENST00000637223 SLC5A1P13866 664 aa21.26■□□□□ 0.99
CLN6-218ENST00000637223 GYG1P46976 350 aa21.26■□□□□ 0.99
CLN6-218ENST00000637223 LPIN2Q92539 896 aa21.26■□□□□ 0.99
CLN6-218ENST00000637223 APBB1O00213 710 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 RAD17O75943 681 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 SLC34A2O95436 690 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 CCDC88AQ3V6T2 1871 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 COA1Q9GZY4 146 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 KCNQ5Q9NR82 932 aa21.25■□□□□ 0.99
CLN6-218ENST00000637223 DDNO94850 711 aaPredicted RBP21.24■□□□□ 0.99
CLN6-218ENST00000637223 CXCL9Q07325 125 aa21.24■□□□□ 0.99
CLN6-218ENST00000637223 AAMPQ13685 434 aa21.24■□□□□ 0.99
CLN6-218ENST00000637223 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
CLN6-218ENST00000637223 ZNF804AQ7Z570 1209 aa21.24■□□□□ 0.99
CLN6-218ENST00000637223 FAM84BQ96KN1 310 aaPredicted RBP21.24■□□□□ 0.99
CLN6-218ENST00000637223 GJA3Q9Y6H8 435 aa21.24■□□□□ 0.99
CLN6-218ENST00000637223 FOXN1O15353 648 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 TIMM10P62072 90 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 HSP90AB4PQ58FF6 505 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 CD209Q9NNX6 404 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 CREBZFQ9NS37 354 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 AKAP2Q9Y2D5 859 aa21.23■□□□□ 0.99
CLN6-218ENST00000637223 DICER1Q9UPY3 1922 aaKnown RBP21.22■□□□□ 0.99
CLN6-218ENST00000637223 A0A1B0GUL7 405 aa21.22■□□□□ 0.99
CLN6-218ENST00000637223 ADORA1P30542 326 aa21.22■□□□□ 0.99
CLN6-218ENST00000637223 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
CLN6-218ENST00000637223 CIAPIN1Q6FI81 312 aa21.22■□□□□ 0.99
CLN6-218ENST00000637223 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
CLN6-218ENST00000637223 ERC1Q8IUD2 1116 aa21.22■□□□□ 0.99
CLN6-218ENST00000637223 BCAMP50895 628 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 CAVIN4Q5BKX8 364 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 FBXO33Q7Z6M2 555 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 VPS37DQ86XT2 251 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 FBXW7Q969H0 707 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 NEUROD6Q96NK8 337 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 ZNF609O15014 1411 aa21.21■□□□□ 0.99
CLN6-218ENST00000637223 PSMD14O00487 310 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 TNIP1Q15025 636 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 GPC2Q8N158 579 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 IL1RAPL2Q9NP60 686 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 IQSEC3Q9UPP2 1182 aaPredicted RBP21.2■□□□□ 0.98
CLN6-218ENST00000637223 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
CLN6-218ENST00000637223 RAB11FIP3O75154 756 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 IL1R1P14778 569 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 CHADLQ6NUI6 762 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 XAGE2Q96GT9 111 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 DCTPP1Q9H773 170 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 GPR108Q9NPR9 543 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 PRDM10Q9NQV6 1147 aa21.19■□□□□ 0.98
CLN6-218ENST00000637223 USP17L3A6NCW0 530 aa21.18■□□□□ 0.98
CLN6-218ENST00000637223 USP17L4A6NCW7 530 aa21.18■□□□□ 0.98
CLN6-218ENST00000637223 USP17L1Q7RTZ2 530 aa21.18■□□□□ 0.98
CLN6-218ENST00000637223 JAG2Q9Y219 1238 aa21.18■□□□□ 0.98
CLN6-218ENST00000637223 PHKA1P46020 1223 aa21.17■□□□□ 0.98
CLN6-218ENST00000637223 GTF2IP78347 998 aa21.17■□□□□ 0.98
CLN6-218ENST00000637223 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms