RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
LINC00643-207ENST00000637212 TBC1D16Q8TBP0 767 aa16.32■□□□□ 0.2
LINC00643-207ENST00000637212 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
LINC00643-207ENST00000637212 HAUS7Q99871 368 aa16.32■□□□□ 0.2
LINC00643-207ENST00000637212 SNAP23O00161 211 aa16.31■□□□□ 0.2
LINC00643-207ENST00000637212 SDSP20132 328 aa16.31■□□□□ 0.2
LINC00643-207ENST00000637212 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
LINC00643-207ENST00000637212 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
LINC00643-207ENST00000637212 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
LINC00643-207ENST00000637212 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
LINC00643-207ENST00000637212 BOLA2Q9H3K6 86 aa16.31■□□□□ 0.2
LINC00643-207ENST00000637212 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
LINC00643-207ENST00000637212 COL4A1P02462 1669 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 IRS2Q9Y4H2 1338 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 SEMA3EO15041 775 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 UFL1O94874 794 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
LINC00643-207ENST00000637212 HIBADHP31937 336 aaKnown RBP16.3■□□□□ 0.2
LINC00643-207ENST00000637212 BCAMP50895 628 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 EVI5LQ96CN4 794 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 RTFDC1Q9BY42 306 aaPredicted RBP16.3■□□□□ 0.2
LINC00643-207ENST00000637212 POLLQ9UGP5 575 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
LINC00643-207ENST00000637212 WTIPA6NIX2 430 aaPredicted RBP16.29■□□□□ 0.2
LINC00643-207ENST00000637212 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 PHKA1P46020 1223 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 EYA3Q99504 573 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
LINC00643-207ENST00000637212 TRIM6-TRIM34B2RNG4 842 aa16.28■□□□□ 0.2
LINC00643-207ENST00000637212 C21orf2O43822 256 aa16.28■□□□□ 0.2
LINC00643-207ENST00000637212 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
LINC00643-207ENST00000637212 GYG1P46976 350 aa16.28■□□□□ 0.2
LINC00643-207ENST00000637212 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
LINC00643-207ENST00000637212 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
LINC00643-207ENST00000637212 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
LINC00643-207ENST00000637212 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.2
LINC00643-207ENST00000637212 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
LINC00643-207ENST00000637212 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
LINC00643-207ENST00000637212 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 PDS5AQ29RF7 1337 aaKnown RBP16.26■□□□□ 0.19
LINC00643-207ENST00000637212 IGSF3O75054 1194 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 CDC45O75419 566 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 PSMD1Q99460 953 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 PAG1Q9NWQ8 432 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
LINC00643-207ENST00000637212 HIP1O00291 1037 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 KLRK1P26718 216 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 MCAMP43121 646 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00643-207ENST00000637212 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
LINC00643-207ENST00000637212 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
LINC00643-207ENST00000637212 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
LINC00643-207ENST00000637212 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
LINC00643-207ENST00000637212 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
LINC00643-207ENST00000637212 IL1R1P14778 569 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 ZAP70P43403 619 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 SCARF1Q14162 830 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 FHDC1Q9C0D6 1143 aaPredicted RBP16.24■□□□□ 0.19
LINC00643-207ENST00000637212 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
LINC00643-207ENST00000637212 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
LINC00643-207ENST00000637212 GOLIM4O00461 696 aa16.23■□□□□ 0.19
LINC00643-207ENST00000637212 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
LINC00643-207ENST00000637212 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
LINC00643-207ENST00000637212 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
LINC00643-207ENST00000637212 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
LINC00643-207ENST00000637212 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
LINC00643-207ENST00000637212 CYP2E1P05181 493 aaPredicted RBP16.22■□□□□ 0.19
LINC00643-207ENST00000637212 CHMLP26374 656 aa16.22■□□□□ 0.19
LINC00643-207ENST00000637212 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
LINC00643-207ENST00000637212 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
LINC00643-207ENST00000637212 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
LINC00643-207ENST00000637212 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 TAF1P21675 1872 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 G3V3G9 751 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
LINC00643-207ENST00000637212 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 WDR66Q8TBY9 1149 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
LINC00643-207ENST00000637212 FSD1Q9BTV5 496 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms