RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 LEMD3Q9Y2U8 911 aa23.38■■□□□ 1.33
CTSD-209ENST00000637158 IGHMBP2P38935 993 aaKnown RBP23.37■■□□□ 1.33
CTSD-209ENST00000637158 CCT4P50991 539 aaKnown RBP23.37■■□□□ 1.33
CTSD-209ENST00000637158 STRIP1Q5VSL9 837 aa23.37■■□□□ 1.33
CTSD-209ENST00000637158 COA1Q9GZY4 146 aa23.37■■□□□ 1.33
CTSD-209ENST00000637158 PSME4Q14997 1843 aa23.36■■□□□ 1.33
CTSD-209ENST00000637158 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
CTSD-209ENST00000637158 H7C1W4 665 aa23.35■■□□□ 1.33
CTSD-209ENST00000637158 NF2P35240 595 aa23.35■■□□□ 1.33
CTSD-209ENST00000637158 DACT2Q5SW24 774 aa23.35■■□□□ 1.33
CTSD-209ENST00000637158 RASAL3Q86YV0 1011 aa23.35■■□□□ 1.33
CTSD-209ENST00000637158 ANKRD2Q9GZV1 360 aa23.35■■□□□ 1.33
CTSD-209ENST00000637158 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
CTSD-209ENST00000637158 CWF19L2Q2TBE0 894 aaKnown RBP23.34■■□□□ 1.33
CTSD-209ENST00000637158 TWISTNBQ3B726 338 aaPredicted RBP23.34■■□□□ 1.33
CTSD-209ENST00000637158 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
CTSD-209ENST00000637158 AKAP11Q9UKA4 1901 aa23.33■■□□□ 1.33
CTSD-209ENST00000637158 PAPPA2Q9BXP8 1791 aa23.33■■□□□ 1.33
CTSD-209ENST00000637158 UBE3BQ7Z3V4 1068 aa23.33■■□□□ 1.33
CTSD-209ENST00000637158 PLA2G12BQ9BX93 195 aa23.33■■□□□ 1.33
CTSD-209ENST00000637158 NBPF9Q3BBW0 867 aa23.32■■□□□ 1.32
CTSD-209ENST00000637158 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
CTSD-209ENST00000637158 CTU1Q7Z7A3 348 aaKnown RBP23.32■■□□□ 1.32
CTSD-209ENST00000637158 FBXW7Q969H0 707 aa23.32■■□□□ 1.32
CTSD-209ENST00000637158 MPHOSPH8Q99549 860 aa23.32■■□□□ 1.32
CTSD-209ENST00000637158 MYH16Q9H6N6 1097 aa23.32■■□□□ 1.32
CTSD-209ENST00000637158 HDAC9Q9UKV0 1011 aa23.32■■□□□ 1.32
CTSD-209ENST00000637158 WNT10BO00744 389 aa23.31■■□□□ 1.32
CTSD-209ENST00000637158 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
CTSD-209ENST00000637158 WWC1Q8IX03 1113 aa23.31■■□□□ 1.32
CTSD-209ENST00000637158 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
CTSD-209ENST00000637158 IL16Q14005 1332 aa23.31■■□□□ 1.32
CTSD-209ENST00000637158 MYH3P11055 1940 aa23.3■■□□□ 1.32
CTSD-209ENST00000637158 WTIPA6NIX2 430 aaPredicted RBP23.3■■□□□ 1.32
CTSD-209ENST00000637158 ITGA6P23229 1130 aa23.3■■□□□ 1.32
CTSD-209ENST00000637158 TTLL12Q14166 644 aaPredicted RBP23.3■■□□□ 1.32
CTSD-209ENST00000637158 GCKRQ14397 625 aa23.3■■□□□ 1.32
CTSD-209ENST00000637158 SLC34A2O95436 690 aa23.29■■□□□ 1.32
CTSD-209ENST00000637158 FLIIQ13045 1269 aa23.29■■□□□ 1.32
CTSD-209ENST00000637158 UBE2Q2LH0YL09 131 aa23.28■■□□□ 1.32
CTSD-209ENST00000637158 CSF1RP07333 972 aa23.28■■□□□ 1.32
CTSD-209ENST00000637158 KCNJ4P48050 445 aa23.28■■□□□ 1.32
CTSD-209ENST00000637158 PKN2Q16513 984 aaKnown RBP23.28■■□□□ 1.32
CTSD-209ENST00000637158 G2E3Q7L622 706 aa23.28■■□□□ 1.32
CTSD-209ENST00000637158 APOBEC3FQ8IUX4 373 aaKnown RBP23.28■■□□□ 1.32
CTSD-209ENST00000637158 TM4SF4P48230 202 aa23.27■■□□□ 1.32
CTSD-209ENST00000637158 FKBP5Q13451 457 aaPredicted RBP23.27■■□□□ 1.32
CTSD-209ENST00000637158 MOB2Q70IA6 237 aa23.27■■□□□ 1.32
CTSD-209ENST00000637158 TXNRD3Q86VQ6 643 aa23.27■■□□□ 1.32
CTSD-209ENST00000637158 LINS1Q8NG48 757 aa23.27■■□□□ 1.32
CTSD-209ENST00000637158 MXD3Q9BW11 206 aa23.27■■□□□ 1.32
CTSD-209ENST00000637158 SREBF2Q12772 1141 aa23.26■■□□□ 1.31
CTSD-209ENST00000637158 PRAMEF18Q5VWM3 479 aa23.26■■□□□ 1.31
CTSD-209ENST00000637158 ARMC9Q7Z3E5 817 aa23.26■■□□□ 1.31
CTSD-209ENST00000637158 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
CTSD-209ENST00000637158 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
CTSD-209ENST00000637158 TNRC18O15417 2968 aaPredicted RBP23.26■■□□□ 1.31
CTSD-209ENST00000637158 ANKRD18BA2A2Z9 1011 aa23.25■■□□□ 1.31
CTSD-209ENST00000637158 CASP7P55210 303 aa23.25■■□□□ 1.31
CTSD-209ENST00000637158 NOM1Q5C9Z4 860 aaKnown RBP23.25■■□□□ 1.31
CTSD-209ENST00000637158 GTF2IP78347 998 aa23.24■■□□□ 1.31
CTSD-209ENST00000637158 CHRNDQ07001 517 aa23.24■■□□□ 1.31
CTSD-209ENST00000637158 KIAA0825Q8IV33 1275 aa23.24■■□□□ 1.31
CTSD-209ENST00000637158 SASH1O94885 1247 aa23.23■■□□□ 1.31
CTSD-209ENST00000637158 CD209Q9NNX6 404 aa23.23■■□□□ 1.31
CTSD-209ENST00000637158 IFIT5Q13325 482 aaKnown RBP23.22■■□□□ 1.31
CTSD-209ENST00000637158 C15orf52Q6ZUT6 534 aaKnown RBP23.22■■□□□ 1.31
CTSD-209ENST00000637158 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
CTSD-209ENST00000637158 TBC1D8O95759 1140 aa23.21■■□□□ 1.31
CTSD-209ENST00000637158 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
CTSD-209ENST00000637158 ZNF296Q8WUU4 475 aaPredicted RBP23.21■■□□□ 1.31
CTSD-209ENST00000637158 ZBED3Q96IU2 234 aaPredicted RBP23.21■■□□□ 1.31
CTSD-209ENST00000637158 COL1A1P02452 1464 aaPredicted RBP23.21■■□□□ 1.31
CTSD-209ENST00000637158 KLRK1P26718 216 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 SOX10P56693 466 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 WDR63Q8IWG1 891 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 MTMR14Q8NCE2 650 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 CFHR5Q9BXR6 569 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 PPP2R3BQ9Y5P8 575 aa23.2■■□□□ 1.3
CTSD-209ENST00000637158 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 MYO1BO43795 1136 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 VAMP4O75379 141 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 INHBEP58166 350 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 PTPN12Q05209 780 aaKnown RBP23.19■■□□□ 1.3
CTSD-209ENST00000637158 LDLRAD1Q5T700 205 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 ZNF804AQ7Z570 1209 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 HPS5Q9UPZ3 1129 aa23.19■■□□□ 1.3
CTSD-209ENST00000637158 UNCXA6NJT0 531 aa23.18■■□□□ 1.3
CTSD-209ENST00000637158 GPR25O00155 361 aa23.18■■□□□ 1.3
CTSD-209ENST00000637158 FKBP1AP62942 108 aaKnown RBP23.18■■□□□ 1.3
CTSD-209ENST00000637158 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
CTSD-209ENST00000637158 DEFB129Q9H1M3 183 aa23.18■■□□□ 1.3
CTSD-209ENST00000637158 ANGEL1Q9UNK9 670 aaKnown RBP23.18■■□□□ 1.3
CTSD-209ENST00000637158 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
CTSD-209ENST00000637158 PPP1R12BO60237 982 aaPredicted RBP23.17■■□□□ 1.3
CTSD-209ENST00000637158 IL1R1P14778 569 aa23.17■■□□□ 1.3
CTSD-209ENST00000637158 ZNF646O15015 1829 aaPredicted RBP23.17■■□□□ 1.3
CTSD-209ENST00000637158 TAF5LO75529 589 aa23.16■■□□□ 1.3
CTSD-209ENST00000637158 MKRN3Q13064 507 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms