RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 ABCC4O15439 1325 aa12.1□□□□□ -0.47
CACNA1A-236ENST00000637117 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 DGKZQ13574 1117 aa12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
CACNA1A-236ENST00000637117 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 H7C1D1 291 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 TRPM4Q8TD43 1214 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 CDHR2Q9BYE9 1310 aa12.08□□□□□ -0.48
CACNA1A-236ENST00000637117 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 NOGQ13253 232 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 ZIC5Q96T25 663 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
CACNA1A-236ENST00000637117 YDJCA8MPS7 323 aa12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 HUNKP57058 714 aa12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 GRAPQ13588 217 aa12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 GRAPLQ8TC17 118 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
CACNA1A-236ENST00000637117 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 ANXA1P04083 346 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 PROSER3Q2NL68 480 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 DLK2Q6UY11 383 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 COPS6Q7L5N1 327 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 DPF2Q92785 391 aa12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-236ENST00000637117 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 MS4A1P11836 297 aa12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 RGMBQ6NW40 437 aa12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
CACNA1A-236ENST00000637117 FAM155AB1AL88 458 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 PSMD14O00487 310 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 C2orf69Q8N8R5 385 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 SH3TC1Q8TE82 1336 aa12.03□□□□□ -0.48
CACNA1A-236ENST00000637117 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 KIF23Q02241 960 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 NSFL1CQ9UNZ2 370 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
CACNA1A-236ENST00000637117 TRPA1O75762 1119 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 EGFRP00533 1210 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 CLCN1P35523 988 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 FOSBP53539 338 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 RIPK4P57078 832 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 ZNF428Q96B54 188 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 RNF186Q9NXI6 227 aa12.01□□□□□ -0.49
CACNA1A-236ENST00000637117 ANKRD36CQ5JPF3 1778 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 ADM5C9JUS6 153 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 C6orf229H3BNL8 230 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 RPS12P25398 132 aaKnown RBP12□□□□□ -0.49
CACNA1A-236ENST00000637117 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
CACNA1A-236ENST00000637117 CELF1Q92879 486 aaKnown RBP12□□□□□ -0.49
CACNA1A-236ENST00000637117 KCNQ5Q9NR82 932 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 POLLQ9UGP5 575 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 TAF1P21675 1872 aa12□□□□□ -0.49
CACNA1A-236ENST00000637117 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 SOX10P56693 466 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 GPSM2P81274 684 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 CSRNP1Q96S65 589 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 EYA3Q99504 573 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 LAMB2P55268 1798 aa11.99□□□□□ -0.49
CACNA1A-236ENST00000637117 ECE2O60344 883 aa11.98□□□□□ -0.49
CACNA1A-236ENST00000637117 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CACNA1A-236ENST00000637117 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
CACNA1A-236ENST00000637117 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
CACNA1A-236ENST00000637117 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms