RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	SF3A1	Q15459	793 aa	Known RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	SWT1	Q5T5J6	900 aa	Known RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CREB3L3	Q68CJ9	461 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	TICAM2	Q86XR7	235 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CNNM3	Q8NE01	707 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	PI4K2B	Q8TCG2	481 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CCDC12	Q8WUD4	166 aa	Predicted RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	MIS18A	Q9NYP9	233 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	ASXL2	Q76L83	1435 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	POTEB2	H3BUK9	544 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	GIGYF1	O75420	1035 aa	Predicted RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	RPS6KA5	O75582	802 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	EIF5	P55010	431 aa	Known RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CHMP4BP1	P59074	171 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	DPCR1	Q3MIW9	517 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CNPY4	Q8N129	248 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	PDILT	Q8N807	584 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	PRAM1	Q96QH2	718 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	TRAIP	Q9BWF2	469 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	BICC1	Q9H694	974 aa	Known RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	TSPYL4	Q9UJ04	414 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	PPP2R2C	Q9Y2T4	447 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	CPSF1	Q10570	1443 aa	Known RBP	6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	SETBP1	Q9Y6X0	1596 aa		6.2	□□□□□ -1.42
RYR3-223	ENST00000636845	MAP2K7	O14733	419 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	CBFA2T2	O43439	604 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	JAK2	O60674	1132 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	PPFIA4	O75335	1185 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	UBASH3A	P57075	661 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	MAP3K9	P80192	1104 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	FANCC	Q00597	558 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	GPATCH3	Q96I76	525 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	ZNF396	Q96N95	335 aa	Predicted RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	WDR24	Q96S15	920 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	INO80	Q9ULG1	1556 aa	Predicted RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	MRFAP1	Q9Y605	127 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	TULP4	Q9NRJ4	1543 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	MRC2	Q9UBG0	1479 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	RPGRIP1L	Q68CZ1	1315 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	YTHDC2	Q9H6S0	1430 aa	Known RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	CCDC196	A0A1B0GTZ2	297 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	ARHGAP6	O43182	974 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	N4BP1	O75113	896 aa	Known RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	WDHD1	O75717	1129 aa	Predicted RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	LIG3	P49916	1009 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	FLII	Q13045	1269 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	REST	Q13127	1097 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	TSGA10IP	Q3SY00	556 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	ISM2	Q6H9L7	571 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	LRRC31	Q6UY01	552 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	RSRC2	Q7L4I2	434 aa	Known RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	PPP1R42	Q7Z4L9	355 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	GIMAP7	Q8NHV1	300 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	FAM71B	Q8TC56	605 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	DHX58	Q96C10	678 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	GBP3	Q9H0R5	595 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	SIL1	Q9H173	461 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	KDM4C	Q9H3R0	1056 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	GOLPH3L	Q9H4A5	285 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	FAM204A	Q9H8W3	233 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	PLSCR2	Q9NRY7	297 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	PUF60	Q9UHX1	559 aa	Known RBP	6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	AKAP2	Q9Y2D5	859 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845	NRXN1	Q9ULB1	1477 aa		6.19	□□□□□ -1.42
RYR3-223	ENST00000636845		H0YHG0	523 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	NECTIN1	Q15223	517 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	SULT6B1	Q6IMI4	303 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	FCHSD1	Q86WN1	690 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	ERC1	Q8IUD2	1116 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	CLASRP	Q8N2M8	674 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	MRPS27	Q92552	414 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	PSMD1	Q99460	953 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	FTO	Q9C0B1	505 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	VWA3A	A6NCI4	1184 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	EBAG9	O00559	213 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	FANCG	O15287	622 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	SLC3A2	P08195	630 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	GSC	P56915	257 aa	Predicted RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	KARS	Q15046	597 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	RRS1	Q15050	365 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	HSP90AB4P	Q58FF6	505 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	WWC2	Q6AWC2	1192 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	SMARCC1	Q92922	1105 aa	Predicted RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	FAM212A	Q96EL1	285 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	USP28	Q96RU2	1077 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	CDK19	Q9BWU1	502 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	MED4	Q9NPJ6	270 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	RCOR1	Q9UKL0	485 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	TET3	O43151	1660 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	ADGRL3	Q9HAR2	1447 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845		A0A1B0GVL5	298 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	SLC27A2	O14975	620 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	CP	P00450	1065 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	RHOXF2B	P0C7M4	288 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	RPS6KB1	P23443	525 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	RDX	P35241	583 aa	Known RBP	6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	SATB1	Q01826	763 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	GOLGA8F	Q08AF8	430 aa		6.18	□□□□□ -1.42
RYR3-223	ENST00000636845	GOLGA8DP	Q0D2H9	430 aa		6.18	□□□□□ -1.42

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