RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MED23Q9ULK4 1368 aa16.06■□□□□ 0.16
CTSD-208ENST00000636843 H7C1W4 665 aa16.06■□□□□ 0.16
CTSD-208ENST00000636843 CWF19L2Q2TBE0 894 aaKnown RBP16.06■□□□□ 0.16
CTSD-208ENST00000636843 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
CTSD-208ENST00000636843 MYOZ2Q9NPC6 264 aa16.06■□□□□ 0.16
CTSD-208ENST00000636843 ASTN2O75129 1339 aaPredicted RBP16.06■□□□□ 0.16
CTSD-208ENST00000636843 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
CTSD-208ENST00000636843 CCDC85CA6NKD9 419 aa16.05■□□□□ 0.16
CTSD-208ENST00000636843 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
CTSD-208ENST00000636843 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
CTSD-208ENST00000636843 G2E3Q7L622 706 aa16.05■□□□□ 0.16
CTSD-208ENST00000636843 SAGE1Q9NXZ1 904 aa16.05■□□□□ 0.16
CTSD-208ENST00000636843 IGHMBP2P38935 993 aaKnown RBP16.04■□□□□ 0.16
CTSD-208ENST00000636843 FKBP1BP68106 108 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
CTSD-208ENST00000636843 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 PLA2G12BQ9BX93 195 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 MCOLN1Q9GZU1 580 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 SLC10A3P09131 477 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 MMP14P50281 582 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 FLIIQ13045 1269 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 GCKRQ14397 625 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 COA1Q9GZY4 146 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
CTSD-208ENST00000636843 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
CTSD-208ENST00000636843 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
CTSD-208ENST00000636843 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
CTSD-208ENST00000636843 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
CTSD-208ENST00000636843 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
CTSD-208ENST00000636843 ANKRD2Q9GZV1 360 aa16.03■□□□□ 0.16
CTSD-208ENST00000636843 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
CTSD-208ENST00000636843 PSME4Q14997 1843 aa16.02■□□□□ 0.16
CTSD-208ENST00000636843 ITGA6P23229 1130 aa16.02■□□□□ 0.15
CTSD-208ENST00000636843 RGS19P49795 217 aa16.02■□□□□ 0.15
CTSD-208ENST00000636843 DGKZQ13574 1117 aa16.02■□□□□ 0.15
CTSD-208ENST00000636843 DACT2Q5SW24 774 aa16.02■□□□□ 0.15
CTSD-208ENST00000636843 LINS1Q8NG48 757 aa16.02■□□□□ 0.15
CTSD-208ENST00000636843 CASP8AP2Q9UKL3 1982 aa16.01■□□□□ 0.15
CTSD-208ENST00000636843 CSF1RP07333 972 aa16.01■□□□□ 0.15
CTSD-208ENST00000636843 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
CTSD-208ENST00000636843 CSRNP1Q96S65 589 aa16.01■□□□□ 0.15
CTSD-208ENST00000636843 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
CTSD-208ENST00000636843 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
CTSD-208ENST00000636843 MYH3P11055 1940 aa16■□□□□ 0.15
CTSD-208ENST00000636843 CASP7P55210 303 aa16■□□□□ 0.15
CTSD-208ENST00000636843 FAM161AQ3B820 660 aa16■□□□□ 0.15
CTSD-208ENST00000636843 WDR63Q8IWG1 891 aa16■□□□□ 0.15
CTSD-208ENST00000636843 ZNF804BA4D1E1 1349 aa16■□□□□ 0.15
CTSD-208ENST00000636843 TRPA1O75762 1119 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 NBPF9Q3BBW0 867 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 TTLL5Q6EMB2 1281 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 RASAL3Q86YV0 1011 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 WNT10BO00744 389 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 VAMP4O75379 141 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 MLLT1Q03111 559 aaPredicted RBP15.99■□□□□ 0.15
CTSD-208ENST00000636843 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 MXD3Q9BW11 206 aa15.99■□□□□ 0.15
CTSD-208ENST00000636843 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
CTSD-208ENST00000636843 PAPPA2Q9BXP8 1791 aa15.97■□□□□ 0.15
CTSD-208ENST00000636843 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
CTSD-208ENST00000636843 NF2P35240 595 aa15.97■□□□□ 0.15
CTSD-208ENST00000636843 KCNJ4P48050 445 aa15.97■□□□□ 0.15
CTSD-208ENST00000636843 CHRNDQ07001 517 aa15.97■□□□□ 0.15
CTSD-208ENST00000636843 UBE2Q2LH0YL09 131 aa15.96■□□□□ 0.15
CTSD-208ENST00000636843 SCAF8Q9UPN6 1271 aaKnown RBP15.96■□□□□ 0.15
CTSD-208ENST00000636843 KLRK1P26718 216 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 GTF2IP78347 998 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
CTSD-208ENST00000636843 IFIT5Q13325 482 aaKnown RBP15.95■□□□□ 0.14
CTSD-208ENST00000636843 PRAMEF18Q5VWM3 479 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
CTSD-208ENST00000636843 MOB2Q70IA6 237 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 APOBEC3FQ8IUX4 373 aaKnown RBP15.95■□□□□ 0.14
CTSD-208ENST00000636843 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
CTSD-208ENST00000636843 TTLL12Q14166 644 aaPredicted RBP15.94■□□□□ 0.14
CTSD-208ENST00000636843 KIAA0825Q8IV33 1275 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 CD209Q9NNX6 404 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
CTSD-208ENST00000636843 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 SASH1O94885 1247 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 FOXO4P98177 505 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 BEND3Q5T5X7 828 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 ARMC9Q7Z3E5 817 aa15.94■□□□□ 0.14
CTSD-208ENST00000636843 ZBED3Q96IU2 234 aaPredicted RBP15.94■□□□□ 0.14
CTSD-208ENST00000636843 F6X3S4 739 aa15.93■□□□□ 0.14
CTSD-208ENST00000636843 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
CTSD-208ENST00000636843 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
CTSD-208ENST00000636843 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
CTSD-208ENST00000636843 CTU1Q7Z7A3 348 aaKnown RBP15.92■□□□□ 0.14
CTSD-208ENST00000636843 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
CTSD-208ENST00000636843 ZNF646O15015 1829 aaPredicted RBP15.92■□□□□ 0.14
CTSD-208ENST00000636843 TAF5LO75529 589 aa15.91■□□□□ 0.14
CTSD-208ENST00000636843 TM4SF4P48230 202 aa15.91■□□□□ 0.14
CTSD-208ENST00000636843 DLGAP5Q15398 846 aa15.91■□□□□ 0.14
CTSD-208ENST00000636843 LMBR1LQ6UX01 489 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms