RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GCKRQ14397 625 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 NFIXQ14938 502 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 R3HDM1Q15032 1099 aaKnown RBP8.44□□□□□ -1.06
UPF3B-205ENST00000636792 HLFQ16534 295 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 PKDCCQ504Y2 493 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 ERICH6BQ5W0A0 696 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 MYD88Q99836 296 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 UTP14AQ9BVJ6 771 aaKnown RBP8.44□□□□□ -1.06
UPF3B-205ENST00000636792 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 SRP68Q9UHB9 627 aaKnown RBP8.44□□□□□ -1.06
UPF3B-205ENST00000636792 PARP3Q9Y6F1 533 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
UPF3B-205ENST00000636792 TNRC6CQ9HCJ0 1690 aaKnown RBP8.43□□□□□ -1.06
UPF3B-205ENST00000636792 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 F6X3S4 739 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 H7C1W4 665 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 SLC19A1P41440 591 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 ST5P78524 1137 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
UPF3B-205ENST00000636792 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 SLC4A10Q6U841 1118 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 ITPRIPQ8IWB1 547 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 TMEM57Q8N5G2 664 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 CNBD1Q8NA66 436 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 ARXQ96QS3 562 aa8.43□□□□□ -1.06
UPF3B-205ENST00000636792 C9orf78Q9NZ63 289 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-205ENST00000636792 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
UPF3B-205ENST00000636792 COL11A2P13942 1736 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-205ENST00000636792 DGAT1O75907 488 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 SERPINB2P05120 415 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 NEFLP07196 543 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 MMP10P09238 476 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 UBTFL1P0CB47 393 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-205ENST00000636792 E2F4Q16254 413 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 SLC10A5Q5PT55 438 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-205ENST00000636792 SPON1Q9HCB6 807 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
UPF3B-205ENST00000636792 LRRC37AA6NMS7 1700 aa8.42□□□□□ -1.06
UPF3B-205ENST00000636792 ARFGEF1Q9Y6D6 1849 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 PDE8AO60658 829 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 RLBP1P12271 317 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 DDR1Q08345 913 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 MTX1Q13505 466 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 CWF19L2Q2TBE0 894 aaKnown RBP8.41□□□□□ -1.06
UPF3B-205ENST00000636792 SUSD4Q5VX71 490 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 USP44Q9H0E7 712 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
UPF3B-205ENST00000636792 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 KLRG2A4D1S0 409 aaPredicted RBP8.4□□□□□ -1.06
UPF3B-205ENST00000636792 ATP5J2-PTCD1G3V325 749 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
UPF3B-205ENST00000636792 NPHP1O15259 732 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 GNAI2P04899 355 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 GPTP24298 496 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
UPF3B-205ENST00000636792 PDE6BP35913 854 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 CASP7P55210 303 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 RABL6Q3YEC7 729 aaPredicted RBP8.4□□□□□ -1.06
UPF3B-205ENST00000636792 CRY2Q49AN0 593 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 UBE3BQ7Z3V4 1068 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
UPF3B-205ENST00000636792 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.06
UPF3B-205ENST00000636792 A0A1B0GUL6 1792 aa8.4□□□□□ -1.07
UPF3B-205ENST00000636792 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 IRS4O14654 1257 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-205ENST00000636792 PLIN1O60240 522 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 OSBPP22059 807 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 CTSWP56202 376 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 TGFB2P61812 414 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
UPF3B-205ENST00000636792 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 BICDL1Q6ZP65 573 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 RPAP2Q8IXW5 612 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-205ENST00000636792 PANK1Q8TE04 598 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 MEIS3Q99687 375 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 ZBTB40Q9NUA8 1239 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 COG6Q9Y2V7 657 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 CD2APQ9Y5K6 639 aa8.39□□□□□ -1.07
UPF3B-205ENST00000636792 SPEF2Q9C093 1822 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 HMMRO75330 724 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 CSF1RP07333 972 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 NBPF7P0C2Y1 421 aaPredicted RBP8.38□□□□□ -1.07
UPF3B-205ENST00000636792 PRR20EP86478 221 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 PRR20CP86479 221 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 PRR20DP86480 221 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 PRR20BP86481 221 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 PRR20AP86496 221 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 SMIM5Q71RC9 77 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 TTC13Q8NBP0 860 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
UPF3B-205ENST00000636792 ZBTB7AO95365 584 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms