RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZSCAN30Q86W11 494 aa22.35■■□□□ 1.17
CLN5-216ENST00000636780 ATP6V1DQ9Y5K8 247 aa22.35■■□□□ 1.17
CLN5-216ENST00000636780 SH3TC1Q8TE82 1336 aa22.35■■□□□ 1.17
CLN5-216ENST00000636780 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
CLN5-216ENST00000636780 AP5Z1O43299 807 aa22.35■■□□□ 1.17
CLN5-216ENST00000636780 DHX32Q7L7V1 743 aaKnown RBP22.34■■□□□ 1.17
CLN5-216ENST00000636780 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
CLN5-216ENST00000636780 FGAP02671 866 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 ATP2B3Q16720 1220 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 SEC31BQ9NQW1 1179 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 RIPOR2Q9Y4F9 1068 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 LAMB4A4D0S4 1761 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 H3BQV1 296 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 CSF1RP07333 972 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 KRT32Q14532 448 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 IFFO2Q5TF58 517 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 HELLSQ9NRZ9 838 aa22.34■■□□□ 1.17
CLN5-216ENST00000636780 IDH1O75874 414 aaKnown RBP22.33■■□□□ 1.17
CLN5-216ENST00000636780 PHKA1P46020 1223 aa22.33■■□□□ 1.17
CLN5-216ENST00000636780 KRT85P78386 507 aa22.33■■□□□ 1.17
CLN5-216ENST00000636780 SPATA32Q96LK8 384 aa22.33■■□□□ 1.17
CLN5-216ENST00000636780 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 CIAO1O76071 339 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 MSNP26038 577 aaKnown RBP22.33■■□□□ 1.16
CLN5-216ENST00000636780 C17orf53Q8N3J3 647 aaPredicted RBP22.33■■□□□ 1.16
CLN5-216ENST00000636780 FAM184AQ8NB25 1140 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 PGBD1Q96JS3 809 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 GPR108Q9NPR9 543 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 DACT1Q9NYF0 836 aa22.33■■□□□ 1.16
CLN5-216ENST00000636780 RXRAP19793 462 aa22.32■■□□□ 1.16
CLN5-216ENST00000636780 UBR2Q8IWV8 1755 aa22.32■■□□□ 1.16
CLN5-216ENST00000636780 PTMAP06454 111 aaKnown RBP22.32■■□□□ 1.16
CLN5-216ENST00000636780 ABCC6O95255 1503 aa22.31■■□□□ 1.16
CLN5-216ENST00000636780 PTPDC1A2A3K4 754 aa22.31■■□□□ 1.16
CLN5-216ENST00000636780 CTSWP56202 376 aa22.31■■□□□ 1.16
CLN5-216ENST00000636780 EXOSC10Q01780 885 aaKnown RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 NSUN7Q8NE18 718 aaKnown RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 LEO1Q8WVC0 666 aaPredicted RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 ERCC4Q92889 916 aaPredicted RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 PKNOX2Q96KN3 472 aa22.31■■□□□ 1.16
CLN5-216ENST00000636780 PIH1D3Q9NQM4 214 aaKnown RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 IQSEC3Q9UPP2 1182 aaPredicted RBP22.31■■□□□ 1.16
CLN5-216ENST00000636780 KCNQ2O43526 872 aa22.31■■□□□ 1.16
CLN5-216ENST00000636780 NR1I2O75469 434 aa22.3■■□□□ 1.16
CLN5-216ENST00000636780 SLC9C2Q5TAH2 1124 aa22.3■■□□□ 1.16
CLN5-216ENST00000636780 DSCC1Q9BVC3 393 aa22.3■■□□□ 1.16
CLN5-216ENST00000636780 APPP05067 770 aa22.29■■□□□ 1.16
CLN5-216ENST00000636780 PDIA3P30101 505 aaKnown RBP22.29■■□□□ 1.16
CLN5-216ENST00000636780 SUSD4Q5VX71 490 aa22.29■■□□□ 1.16
CLN5-216ENST00000636780 GPAA1O43292 621 aa22.29■■□□□ 1.16
CLN5-216ENST00000636780 ADCY5O95622 1261 aa22.29■■□□□ 1.16
CLN5-216ENST00000636780 TRIM28Q13263 835 aaKnown RBP22.29■■□□□ 1.16
CLN5-216ENST00000636780 ANKRD18BA2A2Z9 1011 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 RESTQ13127 1097 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 TTC12Q9H892 705 aaPredicted RBP22.28■■□□□ 1.16
CLN5-216ENST00000636780 SENP2Q9HC62 589 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 GOLGA6L4A6NEF3 574 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 PHF14O94880 888 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 PDCP20941 246 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 ALDH8A1Q9H2A2 487 aaPredicted RBP22.28■■□□□ 1.16
CLN5-216ENST00000636780 AKAP2Q9Y2D5 859 aa22.28■■□□□ 1.16
CLN5-216ENST00000636780 BCL9O00512 1426 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 ATP6V1AP38606 617 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 CCDC144CPQ8IYA2 1237 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 FBXW7Q969H0 707 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 FUCA2Q9BTY2 467 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 RIC1Q4ADV7 1423 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 PFKFB2O60825 505 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 BICD2Q8TD16 824 aa22.27■■□□□ 1.16
CLN5-216ENST00000636780 TEX13AQ9BXU3 409 aaPredicted RBP22.27■■□□□ 1.16
CLN5-216ENST00000636780 ABCA3Q99758 1704 aa22.27■■□□□ 1.15
CLN5-216ENST00000636780 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 SPC24Q8NBT2 197 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 PIP4K2BP78356 416 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 LUZP1Q86V48 1076 aa22.26■■□□□ 1.15
CLN5-216ENST00000636780 ITPK1Q13572 414 aa22.25■■□□□ 1.15
CLN5-216ENST00000636780 NOL7Q9UMY1 257 aaKnown RBP22.25■■□□□ 1.15
CLN5-216ENST00000636780 UBE2Q2LH0YL09 131 aa22.25■■□□□ 1.15
CLN5-216ENST00000636780 FDPSP14324 419 aaKnown RBP22.25■■□□□ 1.15
CLN5-216ENST00000636780 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
CLN5-216ENST00000636780 POLR3DP05423 398 aaPredicted RBP22.24■■□□□ 1.15
CLN5-216ENST00000636780 ANTXR2P58335 489 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 VGLL2Q8N8G2 317 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 MARCH10Q8NA82 808 aaPredicted RBP22.24■■□□□ 1.15
CLN5-216ENST00000636780 AIFM3Q96NN9 605 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLN5-216ENST00000636780 PRC1O43663 620 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 PDE8BO95263 885 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 INTS5Q6P9B9 1019 aaKnown RBP22.24■■□□□ 1.15
CLN5-216ENST00000636780 EP400Q96L91 3159 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 CRKLP46109 303 aaKnown RBP22.24■■□□□ 1.15
CLN5-216ENST00000636780 FAM182BQ5T319 152 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 USP28Q96RU2 1077 aa22.24■■□□□ 1.15
CLN5-216ENST00000636780 PAPPAQ13219 1627 aa22.23■■□□□ 1.15
CLN5-216ENST00000636780 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms