RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 CALML3P27482 149 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 CACNA2D4Q7Z3S7 1137 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 MRPS27Q92552 414 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 EYA3Q99504 573 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 GLI2P10070 1586 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 QRICH2Q9H0J4 1663 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 USP19O94966 1318 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 CETN2P41208 172 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 SYKP43405 635 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 TNNI3KQ59H18 835 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 NAP1L4Q99733 375 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 SEPT11Q9NVA2 429 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 FPGT-TNNI3KV9GXZ4 949 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 EYA2O00167 538 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 PUM3Q15397 648 aaKnown RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 ZNF622Q969S3 477 aaKnown RBP eCLIP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 ANKARQ7Z5J8 1434 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 MAP9Q49MG5 647 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 AK2P54819 239 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 KRT24Q2M2I5 525 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CKAP2LQ8IYA6 745 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 BCL11BQ9C0K0 894 aaPredicted RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 MADDQ8WXG6 1647 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 UBA7P41226 1012 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 EIF4A1P60842 406 aaKnown RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CETN1Q12798 172 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 USP48Q86UV5 1035 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 ADCY5O95622 1261 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 KRT2P35908 639 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 MAGEB6Q8N7X4 407 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 LLPHQ9BRT6 129 aaKnown RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CEP152O94986 1710 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 CAMSAP1Q5T5Y3 1602 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 USP6P35125 1406 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 KLHL10Q6JEL2 608 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 G2E3Q7L622 706 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 NECAB1Q8N987 351 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 LARP6Q9BRS8 491 aaKnown RBP7.42□□□□□ -1.22
PDE4D-228ENST00000636120 EXOC1Q9NV70 894 aa7.42□□□□□ -1.22
PDE4D-228ENST00000636120 MROH5Q6ZUA9 1318 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 ZNF165P49910 485 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 AXDND1Q5T1B0 1012 aaPredicted RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 C6orf50Q9HD87 102 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 CNPY2Q9Y2B0 182 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 ADGRB3O60242 1522 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 TUBB4AP04350 444 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 RPS6KB1P23443 525 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 UBXN4Q92575 508 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 PLEKHF1Q96S99 279 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 SPAG1Q07617 926 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 LMTK2Q8IWU2 1503 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 MTIF2P46199 727 aaKnown RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 FAM177A1Q8N128 213 aaPredicted RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 EHBP1Q8NDI1 1231 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 RRP36Q96EU6 259 aaKnown RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 ALS2CR12Q96Q35 445 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 USP25Q9UHP3 1055 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 ZC3H13Q5T200 1668 aaKnown RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 TRAPPC3LQ5T215 181 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 ORAI2Q96SN7 254 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 FEZ1Q99689 392 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 CGNQ9P2M7 1197 aaKnown RBP7.41□□□□□ -1.22
PDE4D-228ENST00000636120 METP08581 1390 aa7.41□□□□□ -1.22
PDE4D-228ENST00000636120 LDHBP07195 334 aaKnown RBP7.4□□□□□ -1.22
PDE4D-228ENST00000636120 ITGA6P23229 1130 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 LTKP29376 864 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 ERCC6L2Q5T890 1561 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 MAST3O60307 1309 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 SH3TC1Q8TE82 1336 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC172P0C7W6 258 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 STAT6P42226 847 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDE4D-228ENST00000636120 E9PCH4 1651 aa7.4□□□□□ -1.22
PDE4D-228ENST00000636120 TRMT2AQ8IZ69 625 aaKnown RBP7.4□□□□□ -1.23
PDE4D-228ENST00000636120 GDPD2Q9HCC8 539 aa7.4□□□□□ -1.23
PDE4D-228ENST00000636120 GCKRQ14397 625 aa7.4□□□□□ -1.23
PDE4D-228ENST00000636120 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.23
PDE4D-228ENST00000636120 LGR6Q9HBX8 967 aa7.4□□□□□ -1.23
PDE4D-228ENST00000636120 PAXBP1Q9Y5B6 917 aa7.4□□□□□ -1.23
PDE4D-228ENST00000636120 A0A1B0GUL7 405 aa7.39□□□□□ -1.23
PDE4D-228ENST00000636120 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-228ENST00000636120 IFI16Q16666 785 aaKnown RBP7.39□□□□□ -1.23
PDE4D-228ENST00000636120 CCDC40Q4G0X9 1142 aa7.39□□□□□ -1.23
PDE4D-228ENST00000636120 SPTLC2O15270 562 aa7.39□□□□□ -1.23
PDE4D-228ENST00000636120 PPP2R5BQ15173 497 aa7.39□□□□□ -1.23
PDE4D-228ENST00000636120 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
PDE4D-228ENST00000636120 SLC27A2O14975 620 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms