RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 GRIK5Q16478 980 aa10.55□□□□□ -0.72
CDKL5-209ENST00000635828 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
CDKL5-209ENST00000635828 ZNF526Q8TF50 670 aaPredicted RBP10.55□□□□□ -0.72
CDKL5-209ENST00000635828 COL1A1P02452 1464 aaPredicted RBP10.55□□□□□ -0.72
CDKL5-209ENST00000635828 RAD17O75943 681 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 CIAO1O76071 339 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 KCNJ4P48050 445 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 CEP126Q9P2H0 1117 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-209ENST00000635828 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 MROH5Q6ZUA9 1318 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 HDAC1Q13547 482 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-209ENST00000635828 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 EDC3Q96F86 508 aaKnown RBP10.54□□□□□ -0.72
CDKL5-209ENST00000635828 XAGE2Q96GT9 111 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
CDKL5-209ENST00000635828 ZNF541Q9H0D2 1346 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 NEFLP07196 543 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
CDKL5-209ENST00000635828 AACSQ86V21 672 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
CDKL5-209ENST00000635828 ZNF609O15014 1411 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 RTKN2Q8IZC4 609 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 PSMD1Q99460 953 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 ZNF646O15015 1829 aaPredicted RBP10.53□□□□□ -0.72
CDKL5-209ENST00000635828 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 PUM3Q15397 648 aaKnown RBP10.53□□□□□ -0.72
CDKL5-209ENST00000635828 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
CDKL5-209ENST00000635828 ECE2O60344 883 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 HMMRO75330 724 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 MAP4K4O95819 1239 aaPredicted RBP10.52□□□□□ -0.72
CDKL5-209ENST00000635828 PDE4AP27815 886 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 KIAA2012Q0VF49 1180 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.72
CDKL5-209ENST00000635828 HDAC5Q9UQL6 1122 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 PCDHAC2Q9Y5I4 1007 aa10.52□□□□□ -0.72
CDKL5-209ENST00000635828 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 ADAMTSL1Q8N6G6 1762 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.73
CDKL5-209ENST00000635828 DDNO94850 711 aaPredicted RBP10.52□□□□□ -0.73
CDKL5-209ENST00000635828 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 LRRCC1Q9C099 1032 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 SCAF8Q9UPN6 1271 aaKnown RBP10.52□□□□□ -0.73
CDKL5-209ENST00000635828 CENPFP49454 3210 aa10.52□□□□□ -0.73
CDKL5-209ENST00000635828 LMNB1P20700 586 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 ANKRD2Q9GZV1 360 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 EGFRP00533 1210 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 LPIN2Q92539 896 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 TMX4Q9H1E5 349 aaPredicted RBP10.51□□□□□ -0.73
CDKL5-209ENST00000635828 CD209Q9NNX6 404 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 AKAP11Q9UKA4 1901 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 ARAP2Q8WZ64 1704 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 CERS5Q8N5B7 392 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
CDKL5-209ENST00000635828 ANTXR1Q9H6X2 564 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
CDKL5-209ENST00000635828 MCAMP43121 646 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 CXCL9Q07325 125 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
CDKL5-209ENST00000635828 RASGRF1Q13972 1273 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 UBE4AQ14139 1066 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 RWDD1Q9H446 243 aaPredicted RBP10.5□□□□□ -0.73
CDKL5-209ENST00000635828 GTF2IP78347 998 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 GJA3Q9Y6H8 435 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 MED23Q9ULK4 1368 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 F8W031 263 aaPredicted RBP10.5□□□□□ -0.73
CDKL5-209ENST00000635828 PSMD14O00487 310 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 GRIN3BO60391 1043 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 MYH13Q9UKX3 1938 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 AOX1Q06278 1338 aa10.5□□□□□ -0.73
CDKL5-209ENST00000635828 HIBADHP31937 336 aaKnown RBP10.49□□□□□ -0.73
CDKL5-209ENST00000635828 FBXO33Q7Z6M2 555 aa10.49□□□□□ -0.73
CDKL5-209ENST00000635828 NUCB1Q02818 461 aa10.49□□□□□ -0.73
CDKL5-209ENST00000635828 BOLA2Q9H3K6 86 aa10.49□□□□□ -0.73
CDKL5-209ENST00000635828 LTBP3Q9NS15 1303 aa10.49□□□□□ -0.73
CDKL5-209ENST00000635828 FZD9O00144 591 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 SLC5A1P13866 664 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 CHD1LQ86WJ1 897 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 VPS37DQ86XT2 251 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
CDKL5-209ENST00000635828 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 IFIT1P09914 478 aaKnown RBP10.48□□□□□ -0.73
CDKL5-209ENST00000635828 ZAP70P43403 619 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 DLK2Q6UY11 383 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 SALL3Q9BXA9 1300 aa10.48□□□□□ -0.73
CDKL5-209ENST00000635828 G3V3G9 751 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms