RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 WBP1LQ9NX94 342 aa19.71■□□□□ 0.75
LINC00339-209ENST00000635450 AOC2O75106 756 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 IGHMBP2P38935 993 aaKnown RBP19.7■□□□□ 0.74
LINC00339-209ENST00000635450 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 SAPCD2Q86UD0 394 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 GGA3Q9NZ52 723 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 PTPRCP08575 1304 aa19.7■□□□□ 0.74
LINC00339-209ENST00000635450 ZNF280AP59817 542 aaPredicted RBP19.69■□□□□ 0.74
LINC00339-209ENST00000635450 CDC37L1Q7L3B6 337 aa19.69■□□□□ 0.74
LINC00339-209ENST00000635450 KRT26Q7Z3Y9 468 aa19.69■□□□□ 0.74
LINC00339-209ENST00000635450 TNS4Q8IZW8 715 aa19.69■□□□□ 0.74
LINC00339-209ENST00000635450 CHRNDQ07001 517 aa19.68■□□□□ 0.74
LINC00339-209ENST00000635450 SCAF8Q9UPN6 1271 aaKnown RBP19.68■□□□□ 0.74
LINC00339-209ENST00000635450 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
LINC00339-209ENST00000635450 IRS2Q9Y4H2 1338 aa19.68■□□□□ 0.74
LINC00339-209ENST00000635450 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 GRM8O00222 908 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 DACT2Q5SW24 774 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 PODNQ7Z5L7 613 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 HELBQ8NG08 1087 aaPredicted RBP19.67■□□□□ 0.74
LINC00339-209ENST00000635450 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
LINC00339-209ENST00000635450 ZNF804BA4D1E1 1349 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
LINC00339-209ENST00000635450 ANKRD18BA2A2Z9 1011 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 TAF5LO75529 589 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 CAPN15O75808 1086 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 LMBR1LQ6UX01 489 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 AGBL3Q8NEM8 1001 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 KAZALD1Q96I82 304 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 MPHOSPH8Q99549 860 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
LINC00339-209ENST00000635450 HSPA8P11142 646 aaKnown RBP19.65■□□□□ 0.74
LINC00339-209ENST00000635450 LBX1P52954 281 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 AIDAQ96BJ3 306 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 SUCLG2Q96I99 432 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 C9orf78Q9NZ63 289 aaPredicted RBP19.65■□□□□ 0.74
LINC00339-209ENST00000635450 LEMD3Q9Y2U8 911 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 ECM29Q5VYK3 1845 aa19.65■□□□□ 0.74
LINC00339-209ENST00000635450 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
LINC00339-209ENST00000635450 SCARF1Q14162 830 aa19.64■□□□□ 0.73
LINC00339-209ENST00000635450 ANGEL2Q5VTE6 544 aaKnown RBP19.64■□□□□ 0.73
LINC00339-209ENST00000635450 DCPSQ96C86 337 aaKnown RBP19.64■□□□□ 0.73
LINC00339-209ENST00000635450 MYOZ2Q9NPC6 264 aa19.64■□□□□ 0.73
LINC00339-209ENST00000635450 ARAP2Q8WZ64 1704 aa19.64■□□□□ 0.73
LINC00339-209ENST00000635450 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
LINC00339-209ENST00000635450 ECE1P42892 770 aa19.63■□□□□ 0.73
LINC00339-209ENST00000635450 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
LINC00339-209ENST00000635450 IFIT5Q13325 482 aaKnown RBP19.63■□□□□ 0.73
LINC00339-209ENST00000635450 ANKRD2Q9GZV1 360 aa19.63■□□□□ 0.73
LINC00339-209ENST00000635450 COA1Q9GZY4 146 aa19.63■□□□□ 0.73
LINC00339-209ENST00000635450 TSKSQ9UJT2 592 aa19.63■□□□□ 0.73
LINC00339-209ENST00000635450 PAPPA2Q9BXP8 1791 aa19.62■□□□□ 0.73
LINC00339-209ENST00000635450 RARSP54136 660 aaKnown RBP19.62■□□□□ 0.73
LINC00339-209ENST00000635450 HUNKP57058 714 aa19.62■□□□□ 0.73
LINC00339-209ENST00000635450 NBPF9Q3BBW0 867 aa19.62■□□□□ 0.73
LINC00339-209ENST00000635450 CDCA5Q96FF9 252 aa19.62■□□□□ 0.73
LINC00339-209ENST00000635450 SASH1O94885 1247 aa19.61■□□□□ 0.73
LINC00339-209ENST00000635450 KCNJ4P48050 445 aa19.61■□□□□ 0.73
LINC00339-209ENST00000635450 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
LINC00339-209ENST00000635450 GBA2Q9HCG7 927 aaPredicted RBP19.61■□□□□ 0.73
LINC00339-209ENST00000635450 CASP8AP2Q9UKL3 1982 aa19.61■□□□□ 0.73
LINC00339-209ENST00000635450 KIF16BQ96L93 1317 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
LINC00339-209ENST00000635450 STRIP1Q5VSL9 837 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 SULF1Q8IWU6 871 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 CERS5Q8N5B7 392 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 HHIPL1Q96JK4 782 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 PUS3Q9BZE2 481 aaKnown RBP19.6■□□□□ 0.73
LINC00339-209ENST00000635450 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
LINC00339-209ENST00000635450 PRDM10Q9NQV6 1147 aa19.6■□□□□ 0.73
LINC00339-209ENST00000635450 NOB1Q9ULX3 412 aaKnown RBP19.6■□□□□ 0.73
LINC00339-209ENST00000635450 UTYO14607 1347 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 GTF2IP78347 998 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 ANKRD44Q8N8A2 993 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 BICC1Q9H694 974 aaKnown RBP19.59■□□□□ 0.73
LINC00339-209ENST00000635450 CD209Q9NNX6 404 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 JAG2Q9Y219 1238 aa19.59■□□□□ 0.73
LINC00339-209ENST00000635450 FAM155AB1AL88 458 aaPredicted RBP19.58■□□□□ 0.72
LINC00339-209ENST00000635450 PLIN1O60240 522 aa19.58■□□□□ 0.72
LINC00339-209ENST00000635450 PRAMEF18Q5VWM3 479 aa19.58■□□□□ 0.72
LINC00339-209ENST00000635450 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
LINC00339-209ENST00000635450 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.72
LINC00339-209ENST00000635450 WNT10BO00744 389 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 CCDC57Q2TAC2 916 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 TAF7LQ5H9L4 462 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 LDHAL6AQ6ZMR3 332 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 C15orf52Q6ZUT6 534 aaKnown RBP19.57■□□□□ 0.72
LINC00339-209ENST00000635450 MOB2Q70IA6 237 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 AKAP11Q9UKA4 1901 aa19.57■□□□□ 0.72
LINC00339-209ENST00000635450 AOX1Q06278 1338 aa19.56■□□□□ 0.72
LINC00339-209ENST00000635450 MYO3BQ8WXR4 1341 aa19.56■□□□□ 0.72
LINC00339-209ENST00000635450 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
LINC00339-209ENST00000635450 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms