RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	DCAF11	Q8TEB1	546 aa		5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ZMYND15	Q9H091	742 aa		5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	TFIP11	Q9UBB9	837 aa	Known RBP	5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CARMIL2	Q6F5E8	1435 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CYP2E1	P05181	493 aa	Predicted RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	MAP4	P27816	1152 aa	Known RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ADM	P35318	185 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	COX20	Q5RI15	118 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	KANK4	Q5T7N3	995 aa	Predicted RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	LCE5A	Q5TCM9	118 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	NLRP13	Q86W25	1043 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	POP1	Q99575	1024 aa	Known RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	RBSN	Q9H1K0	784 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	PAK6	Q9NQU5	681 aa	Predicted RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ANGEL1	Q9UNK9	670 aa	Known RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	LEMD3	Q9Y2U8	911 aa		5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	RBM19	Q9Y4C8	960 aa	Known RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.14	□□□□□ -1.59
SMARCB1-208	ENST00000634926	NLRP12	P59046	1061 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	WFDC3	Q8IUB2	231 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	TP53INP2	Q8IXH6	220 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CACTIN-AS1	Q8N1I8	211 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	KLHL23	Q8NBE8	558 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ARX	Q96QS3	562 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	SAP130	Q9H0E3	1048 aa		5.13	□□□□□ -1.59
SMARCB1-208	ENST00000634926	SART1	O43290	800 aa	Known RBP	5.12	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ACPP	P15309	386 aa		5.12	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ANKRD34A	Q69YU3	496 aa		5.12	□□□□□ -1.59
SMARCB1-208	ENST00000634926	SEC31B	Q9NQW1	1179 aa		5.12	□□□□□ -1.59
SMARCB1-208	ENST00000634926	DLGAP3	O95886	979 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	JUNB	P17275	347 aa	Predicted RBP	5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	VSIG10L	Q86VR7	867 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ANKMY2	Q8IV38	441 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CEP120	Q8N960	986 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	PBX4	Q9BYU1	374 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ADAM19	Q9H013	955 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ATG3	Q9NT62	314 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ABCC9	O60706	1549 aa		5.11	□□□□□ -1.59
SMARCB1-208	ENST00000634926	FOXO3	O43524	673 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	SMNDC1	O75940	238 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	KIF4A	O95239	1232 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	HYAL2	Q12891	473 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	GATA6	Q92908	595 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	FBXL18	Q96ME1	805 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	HHIP	Q96QV1	700 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	RUSC1	Q9BVN2	902 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	OSBPL1A	Q9BXW6	950 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	RNF208	Q9H0X6	261 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	HIF3A	Q9Y2N7	669 aa		5.1	□□□□□ -1.59
SMARCB1-208	ENST00000634926	FAM170B	A6NMN3	283 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	DBX1	A6NMT0	343 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L15	C9J2P7	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L10	C9JJH3	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L13	C9JLJ4	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L12	C9JPN9	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L11	C9JVI0	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L21	D6R901	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L18	D6R9N7	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L22	D6RA61	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L17	D6RBQ6	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L19	D6RCP7	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L20	D6RJB6	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	TRPA1	O75762	1119 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	DRD2	P14416	443 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	USP17L24	Q0WX57	530 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	FKBP5	Q13451	457 aa	Predicted RBP	5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CDPF1	Q6NVV7	123 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	LARP1	Q6PKG0	1096 aa	Known RBP	5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	CAPN12	Q6ZSI9	719 aa		5.09	□□□□□ -1.59
SMARCB1-208	ENST00000634926	UBAP1L	F5GYI3	381 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	NFKBIE	O00221	500 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TIAF1	O95411	115 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FDX2	Q6P4F2	183 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	CILP2	Q8IUL8	1156 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FLCN	Q8NFG4	579 aa		5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	BSDC1	Q9NW68	430 aa	Predicted RBP	5.08	□□□□□ -1.6
SMARCB1-208	ENST00000634926	MEGF11	A6BM72	1044 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926		A6NJR5	290 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926		H3BRJ5	948 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TNFRSF10B	O14763	440 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	CYP26A1	O43174	497 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	GAS2	O43903	313 aa	Known RBP	5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	RXRB	P28702	533 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SCNN1A	P37088	669 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SPRED2	Q7Z698	418 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FBLIM1	Q8WUP2	373 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TMPRSS13	Q9BYE2	586 aa		5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.07	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZBTB39	O15060	712 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	PTPRA	P18433	802 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	PIP4K2B	P78356	416 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	NFKBIB	Q15653	356 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TMEM132A	Q24JP5	1023 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FAM117B	Q6P1L5	589 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	C12orf50	Q8NA57	414 aa	Predicted RBP	5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SLC7A3	Q8WY07	619 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	VTI1A	Q96AJ9	217 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SPACA7	Q96KW9	195 aa		5.06	□□□□□ -1.6

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