RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PODNQ7Z5L7 613 aa19.89■□□□□ 0.77
SNRNP48-203ENST00000634363 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
SNRNP48-203ENST00000634363 IGKV5-2P06315 115 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 SLC10A3P09131 477 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 CWF19L2Q2TBE0 894 aaKnown RBP19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 TTLL11Q8NHH1 800 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 TSR2Q969E8 191 aaKnown RBP19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 STK31Q9BXU1 1019 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 GREM2Q9H772 168 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 MINPP1Q9UNW1 487 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 PSME4Q14997 1843 aa19.88■□□□□ 0.77
SNRNP48-203ENST00000634363 PRAMEF18Q5VWM3 479 aa19.87■□□□□ 0.77
SNRNP48-203ENST00000634363 GMLQ99445 158 aa19.87■□□□□ 0.77
SNRNP48-203ENST00000634363 MXD3Q9BW11 206 aa19.87■□□□□ 0.77
SNRNP48-203ENST00000634363 SAGE1Q9NXZ1 904 aa19.87■□□□□ 0.77
SNRNP48-203ENST00000634363 MYH3P11055 1940 aa19.86■□□□□ 0.77
SNRNP48-203ENST00000634363 MOB2Q70IA6 237 aa19.86■□□□□ 0.77
SNRNP48-203ENST00000634363 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
SNRNP48-203ENST00000634363 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 CCT4P50991 539 aaKnown RBP19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 TTLL12Q14166 644 aaPredicted RBP19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 NBPF9Q3BBW0 867 aa19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 UBE3BQ7Z3V4 1068 aa19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 OGFOD1Q8N543 542 aa19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
SNRNP48-203ENST00000634363 UBE2Q2LH0YL09 131 aa19.84■□□□□ 0.77
SNRNP48-203ENST00000634363 SLC4A2P04920 1241 aa19.84■□□□□ 0.77
SNRNP48-203ENST00000634363 G2E3Q7L622 706 aa19.84■□□□□ 0.77
SNRNP48-203ENST00000634363 RASAL3Q86YV0 1011 aa19.84■□□□□ 0.77
SNRNP48-203ENST00000634363 NEURL1BA8MQ27 555 aa19.83■□□□□ 0.77
SNRNP48-203ENST00000634363 IGHMBP2P38935 993 aaKnown RBP19.83■□□□□ 0.77
SNRNP48-203ENST00000634363 FKBP1BP68106 108 aa19.83■□□□□ 0.77
SNRNP48-203ENST00000634363 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
SNRNP48-203ENST00000634363 MED23Q9ULK4 1368 aa19.83■□□□□ 0.76
SNRNP48-203ENST00000634363 ZNF521Q96K83 1311 aa19.82■□□□□ 0.76
SNRNP48-203ENST00000634363 PITPNM2Q9BZ72 1349 aa19.82■□□□□ 0.76
SNRNP48-203ENST00000634363 DACT2Q5SW24 774 aa19.82■□□□□ 0.76
SNRNP48-203ENST00000634363 TXNRD3Q86VQ6 643 aa19.82■□□□□ 0.76
SNRNP48-203ENST00000634363 ZNF609O15014 1411 aa19.82■□□□□ 0.76
SNRNP48-203ENST00000634363 H7C1W4 665 aa19.81■□□□□ 0.76
SNRNP48-203ENST00000634363 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
SNRNP48-203ENST00000634363 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
SNRNP48-203ENST00000634363 PAPPA2Q9BXP8 1791 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 WNT10BO00744 389 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 ITGA6P23229 1130 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 SOX10P56693 466 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 STRIP1Q5VSL9 837 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 TTLL5Q6EMB2 1281 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 MPHOSPH8Q99549 860 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 LEMD3Q9Y2U8 911 aa19.8■□□□□ 0.76
SNRNP48-203ENST00000634363 SASH1O94885 1247 aa19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 TBC1D8O95759 1140 aa19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 NF2P35240 595 aa19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 KCNJ4P48050 445 aa19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 MKRN3Q13064 507 aaKnown RBP19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 PRKG1Q13976 671 aa19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
SNRNP48-203ENST00000634363 ZNF804BA4D1E1 1349 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 MYO3BQ8WXR4 1341 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 E9PSI1 815 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 GTF2IP78347 998 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 GCKRQ14397 625 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 CTU1Q7Z7A3 348 aaKnown RBP19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 KIAA0825Q8IV33 1275 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 ANKRD2Q9GZV1 360 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 HDAC9Q9UKV0 1011 aa19.78■□□□□ 0.76
SNRNP48-203ENST00000634363 KLRK1P26718 216 aa19.77■□□□□ 0.76
SNRNP48-203ENST00000634363 FKBP5Q13451 457 aaPredicted RBP19.77■□□□□ 0.76
SNRNP48-203ENST00000634363 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNRNP48-203ENST00000634363 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
SNRNP48-203ENST00000634363 FLIIQ13045 1269 aa19.76■□□□□ 0.75
SNRNP48-203ENST00000634363 CHRNDQ07001 517 aa19.75■□□□□ 0.75
SNRNP48-203ENST00000634363 DNAAF4Q8WXU2 420 aa19.75■□□□□ 0.75
SNRNP48-203ENST00000634363 ZNF646O15015 1829 aaPredicted RBP19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 SNAP23O00161 211 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 SLC34A2O95436 690 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 CSF1RP07333 972 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 ARMC9Q7Z3E5 817 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 HELBQ8NG08 1087 aaPredicted RBP19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 PLA2G12BQ9BX93 195 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
SNRNP48-203ENST00000634363 ANKRD18BA2A2Z9 1011 aa19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 TAF5LO75529 589 aa19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 PTPN12Q05209 780 aaKnown RBP19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 APOBEC3FQ8IUX4 373 aaKnown RBP19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 ZNF296Q8WUU4 475 aaPredicted RBP19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 CD209Q9NNX6 404 aa19.73■□□□□ 0.75
SNRNP48-203ENST00000634363 TM4SF4P48230 202 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 MMP14P50281 582 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 CASP7P55210 303 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 ANGEL1Q9UNK9 670 aaKnown RBP19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 FZD1Q9UP38 647 aa19.72■□□□□ 0.75
SNRNP48-203ENST00000634363 F8W031 263 aaPredicted RBP19.71■□□□□ 0.75
SNRNP48-203ENST00000634363 DLGAP5Q15398 846 aa19.71■□□□□ 0.75
SNRNP48-203ENST00000634363 HPS5Q9UPZ3 1129 aa19.71■□□□□ 0.75
SNRNP48-203ENST00000634363 F6X3S4 739 aa19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 GPR25O00155 361 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms