RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 BAHCC1Q9P281 2608 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 ECM2O94769 699 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-220ENST00000628906 FOSL2P15408 326 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 LACTBP83111 547 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-220ENST00000628906 KIF22Q14807 665 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 HLFQ16534 295 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 C3orf67Q6ZVT6 689 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 NECAB2Q7Z6G3 386 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 USP38Q8NB14 1042 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 AGBL3Q8NEM8 1001 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 ANGEL1Q9UNK9 670 aaKnown RBP8.32□□□□□ -1.08
LINC00649-220ENST00000628906 RIPOR2Q9Y4F9 1068 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 CACNA1BQ00975 2339 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 CFAP54Q96N23 3096 aa8.32□□□□□ -1.08
LINC00649-220ENST00000628906 TFRCP02786 760 aaKnown RBP8.31□□□□□ -1.08
LINC00649-220ENST00000628906 GJA5P36382 358 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 UBXN2AP68543 259 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 PRKG1Q13976 671 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 GMLQ99445 158 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 CRISPLD2Q9H0B8 497 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 TTYH1Q9H313 450 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-220ENST00000628906 SRRDQ9UH36 339 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
LINC00649-220ENST00000628906 ABCC4O15439 1325 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 ECE2O60344 883 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 TLR2O60603 784 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 GPR37L1O60883 481 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-220ENST00000628906 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-220ENST00000628906 NBPF9Q3BBW0 867 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 TMEM31Q5JXX7 168 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 CLMNQ96JQ2 1002 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 MS4A4AQ96JQ5 239 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 NLRP3Q96P20 1036 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 TESK2Q96S53 571 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 USP16Q9Y5T5 823 aa8.3□□□□□ -1.08
LINC00649-220ENST00000628906 USP34Q70CQ2 3546 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 USP17L8P0C7I0 530 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 SLC10A5Q5PT55 438 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
LINC00649-220ENST00000628906 RAET1EQ8TD07 263 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
LINC00649-220ENST00000628906 IBTKQ9P2D0 1353 aaPredicted RBP8.29□□□□□ -1.08
LINC00649-220ENST00000628906 DUOX1Q9NRD9 1551 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 HOXD10P28358 340 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 CTGFP29279 349 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 MRPS5P82675 430 aaKnown RBP8.28□□□□□ -1.08
LINC00649-220ENST00000628906 SULT6B1Q6IMI4 303 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 RSBN1LQ6PCB5 846 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-220ENST00000628906 BIN2Q9UBW5 565 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-220ENST00000628906 FZD1Q9UP38 647 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
LINC00649-220ENST00000628906 KIF20BQ96Q89 1820 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 UNC79Q9P2D8 2635 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 ERVV-1B6SEH8 477 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 WNT10BO00744 389 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 RIMBP2O15034 1052 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 OSBPP22059 807 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 DOK7Q18PE1 504 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 SUSD4Q5VX71 490 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
LINC00649-220ENST00000628906 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
LINC00649-220ENST00000628906 BRI3BPQ8WY22 251 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 DEFB118Q96PH6 123 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 C11orf16Q9NQ32 467 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
LINC00649-220ENST00000628906 POLLQ9UGP5 575 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 EPG5Q9HCE0 2579 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 XIRP2A4UGR9 3374 aa8.27□□□□□ -1.09
LINC00649-220ENST00000628906 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
LINC00649-220ENST00000628906 NTSR2O95665 410 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 PSMC4P43686 418 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 NHLH1Q02575 133 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 FAM43AQ8N2R8 423 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 NBPF3Q9H094 633 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 THEGQ9P2T0 379 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 SCN9AQ15858 1988 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 UBN2Q6ZU65 1347 aa8.26□□□□□ -1.09
LINC00649-220ENST00000628906 DNAH12Q6ZR08 3092 aa8.25□□□□□ -1.09
LINC00649-220ENST00000628906 SMAD3P84022 425 aaKnown RBP8.25□□□□□ -1.09
LINC00649-220ENST00000628906 MDM2Q00987 491 aaPredicted RBP8.25□□□□□ -1.09
LINC00649-220ENST00000628906 C17orf99Q6UX52 265 aa8.25□□□□□ -1.09
LINC00649-220ENST00000628906 NSFL1CQ9UNZ2 370 aaKnown RBP8.25□□□□□ -1.09
LINC00649-220ENST00000628906 COL3A1P02461 1466 aaPredicted RBP8.25□□□□□ -1.09
LINC00649-220ENST00000628906 WDHD1O75717 1129 aaPredicted RBP8.24□□□□□ -1.09
LINC00649-220ENST00000628906 BMP1P13497 986 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms