RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
LINC01943-202ENST00000628090 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
LINC01943-202ENST00000628090 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
LINC01943-202ENST00000628090 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
LINC01943-202ENST00000628090 EYA2O00167 538 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 CSF1RP07333 972 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 SDSP20132 328 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
LINC01943-202ENST00000628090 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
LINC01943-202ENST00000628090 GPR108Q9NPR9 543 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 LAMB2P55268 1798 aa12.32□□□□□ -0.44
LINC01943-202ENST00000628090 NTSR2O95665 410 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 MCCP23508 829 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01943-202ENST00000628090 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 SOGA3Q5TF21 947 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
LINC01943-202ENST00000628090 SASH1O94885 1247 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 TFCP2Q12800 502 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 OTUD7AQ8TE49 926 aaPredicted RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 CDC5LQ99459 802 aaKnown RBP12.3□□□□□ -0.44
LINC01943-202ENST00000628090 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
LINC01943-202ENST00000628090 ITGA6P23229 1130 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 CCDC158Q5M9N0 1113 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 RTKN2Q8IZC4 609 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 MROH5Q6ZUA9 1318 aa12.29□□□□□ -0.44
LINC01943-202ENST00000628090 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-202ENST00000628090 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 TBC1D32Q96NH3 1257 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 CCDC8Q9H0W5 538 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-202ENST00000628090 DIAPH3Q9NSV4 1193 aa12.28□□□□□ -0.44
LINC01943-202ENST00000628090 EPB41L2O43491 1005 aaKnown RBP12.27□□□□□ -0.45
LINC01943-202ENST00000628090 ATP5JP18859 108 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
LINC01943-202ENST00000628090 SLC10A5Q5PT55 438 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 JMYQ8N9B5 988 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
LINC01943-202ENST00000628090 EAF2Q96CJ1 260 aaPredicted RBP12.27□□□□□ -0.45
LINC01943-202ENST00000628090 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 TAF1DQ9H5J8 278 aaPredicted RBP12.27□□□□□ -0.45
LINC01943-202ENST00000628090 RTL9Q8NET4 1388 aa12.27□□□□□ -0.45
LINC01943-202ENST00000628090 COL4A5P29400 1685 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 DDX60Q8IY21 1712 aaKnown RBP12.26□□□□□ -0.45
LINC01943-202ENST00000628090 FZD9O00144 591 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 PI4K2BQ8TCG2 481 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 RBM17Q96I25 401 aaKnown RBP12.26□□□□□ -0.45
LINC01943-202ENST00000628090 ZNF594Q96JF6 807 aaPredicted RBP12.26□□□□□ -0.45
LINC01943-202ENST00000628090 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
LINC01943-202ENST00000628090 CCDC85AQ96PX6 553 aaPredicted RBP12.26□□□□□ -0.45
LINC01943-202ENST00000628090 CRAMP1Q96RY5 1269 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 PSMD1Q99460 953 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 GREM2Q9H772 168 aa12.26□□□□□ -0.45
LINC01943-202ENST00000628090 SEC24BO95487 1268 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 TTC39AQ5SRH9 613 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 TSHZ3Q63HK5 1081 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC01943-202ENST00000628090 FSD1Q9BTV5 496 aa12.25□□□□□ -0.45
LINC01943-202ENST00000628090 A0A1B0GUL7 405 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
LINC01943-202ENST00000628090 SLC5A1P13866 664 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 CHMLP26374 656 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
LINC01943-202ENST00000628090 ATP2B3Q16720 1220 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 RIC1Q4ADV7 1423 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 EAPPQ56P03 285 aaPredicted RBP12.24□□□□□ -0.45
LINC01943-202ENST00000628090 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
LINC01943-202ENST00000628090 ZNF609O15014 1411 aa12.23□□□□□ -0.45
LINC01943-202ENST00000628090 RFX7Q2KHR2 1363 aa12.23□□□□□ -0.45
LINC01943-202ENST00000628090 RAD50Q92878 1312 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms