RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
SPTAN1-212ENST00000627441 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
SPTAN1-212ENST00000627441 GMLQ99445 158 aa11.1□□□□□ -0.63
SPTAN1-212ENST00000627441 RNF208Q9H0X6 261 aa11.1□□□□□ -0.63
SPTAN1-212ENST00000627441 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 MGAMO43451 1857 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 BBOX1O75936 387 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 GPSM2P81274 684 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 MYLIPQ8WY64 445 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
SPTAN1-212ENST00000627441 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 SASH1O94885 1247 aa11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 GRAPQ13588 217 aa11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 TAF1CQ15572 869 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 DDX60LQ5H9U9 1706 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-212ENST00000627441 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 WNT10BO00744 389 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 GRK4P32298 578 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 FAM43AQ8N2R8 423 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
SPTAN1-212ENST00000627441 SGPL1O95470 568 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 SLC10A5Q5PT55 438 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 RIPOR2Q9Y4F9 1068 aa11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 TCF20Q9UGU0 1960 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-212ENST00000627441 CEMIPQ8WUJ3 1361 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 SNRPA1P09661 255 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 ARHGEF6Q15052 776 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 CELF1Q92879 486 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
SPTAN1-212ENST00000627441 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
SPTAN1-212ENST00000627441 OSBPP22059 807 aa11.03□□□□□ -0.64
SPTAN1-212ENST00000627441 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
SPTAN1-212ENST00000627441 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
SPTAN1-212ENST00000627441 TTYH1Q9H313 450 aaPredicted RBP11.03□□□□□ -0.64
SPTAN1-212ENST00000627441 SRRDQ9UH36 339 aa11.03□□□□□ -0.64
SPTAN1-212ENST00000627441 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 SEMA6BQ9H3T3 888 aa11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 ELP3Q9H9T3 547 aa11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 BIN2Q9UBW5 565 aaPredicted RBP11.02□□□□□ -0.65
SPTAN1-212ENST00000627441 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 FOSL2P15408 326 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 KIF22Q14807 665 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 CCL15Q16663 113 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 RAET1EQ8TD07 263 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 EYA3Q99504 573 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 UTP14AQ9BVJ6 771 aaKnown RBP11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
SPTAN1-212ENST00000627441 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 TLR2O60603 784 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 MYL6BP14649 208 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 PSMC4P43686 418 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 PRMT2P55345 433 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
SPTAN1-212ENST00000627441 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 LRFN3Q9BTN0 628 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 LTBP2Q14767 1821 aa11□□□□□ -0.65
SPTAN1-212ENST00000627441 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 REV3LO60673 3130 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 USP2O75604 605 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 UBXN2AP68543 259 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 PRKCZQ05513 592 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 NECAB3Q96P71 396 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 GABRQQ9UN88 632 aa10.99□□□□□ -0.65
SPTAN1-212ENST00000627441 RRP7AQ9Y3A4 280 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms