RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ERVV-2B6SEH9 535 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 ACTN4O43707 911 aaKnown RBP10.19□□□□□ -0.78
CHD2-209ENST00000627185 IGKV5-2P06315 115 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 FDX1P10109 184 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 GCKRQ14397 625 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 USPL1Q5W0Q7 1092 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 FMNL2Q96PY5 1086 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 PRR14Q9BWN1 585 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 IL1RAPL2Q9NP60 686 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 TSR3Q9UJK0 312 aaKnown RBP10.19□□□□□ -0.78
CHD2-209ENST00000627185 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
CHD2-209ENST00000627185 GLI3P10071 1580 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 MEGF6O75095 1541 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 RPAP1Q9BWH6 1393 aaPredicted RBP10.18□□□□□ -0.78
CHD2-209ENST00000627185 CCDC171Q6TFL3 1326 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 LILRB3O75022 631 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 SASH1O94885 1247 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 LETM1O95202 739 aaPredicted RBP10.18□□□□□ -0.78
CHD2-209ENST00000627185 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
CHD2-209ENST00000627185 ATP5JP18859 108 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 PSMA5P28066 241 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 RFC5P40937 340 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 G3BP1Q13283 466 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD2-209ENST00000627185 ANKRD1Q15327 319 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 QPCTQ16769 361 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 PROSER3Q2NL68 480 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 ZSCAN23Q3MJ62 389 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 PRPF38BQ5VTL8 546 aaKnown RBP10.18□□□□□ -0.78
CHD2-209ENST00000627185 LRSAM1Q6UWE0 723 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 HLA-CQ95604 372 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 SYAP1Q96A49 352 aaPredicted RBP10.18□□□□□ -0.78
CHD2-209ENST00000627185 SUCLG2Q96I99 432 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 PCDHGC3Q9UN70 934 aa10.18□□□□□ -0.78
CHD2-209ENST00000627185 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 MED23Q9ULK4 1368 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 MCM5P33992 734 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 RFX5P48382 616 aaPredicted RBP10.17□□□□□ -0.78
CHD2-209ENST00000627185 CASP7P55210 303 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 PPP4CP60510 307 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 CSPP1Q1MSJ5 1256 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 FAM184AQ8NB25 1140 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 RGS22Q8NE09 1264 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 ANP32BQ92688 251 aaKnown RBP10.17□□□□□ -0.78
CHD2-209ENST00000627185 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
CHD2-209ENST00000627185 IL25Q9H293 177 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 BICC1Q9H694 974 aaKnown RBP10.17□□□□□ -0.78
CHD2-209ENST00000627185 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
CHD2-209ENST00000627185 SOS2Q07890 1332 aaPredicted RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 CYP27B1O15528 508 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 ZKSCAN1P17029 563 aaPredicted RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 NASPP49321 788 aaPredicted RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 TERF1P54274 439 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 PKP1Q13835 747 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 KRT32Q14532 448 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHD2-209ENST00000627185 EAF2Q96CJ1 260 aaPredicted RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 ZNF496Q96IT1 587 aaPredicted RBP10.16□□□□□ -0.78
CHD2-209ENST00000627185 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
CHD2-209ENST00000627185 WDR17Q8IZU2 1322 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 ESPNB1AK53 854 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 H7C1W4 665 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 OS9Q13438 667 aaPredicted RBP10.15□□□□□ -0.78
CHD2-209ENST00000627185 CWF19L2Q2TBE0 894 aaKnown RBP10.15□□□□□ -0.78
CHD2-209ENST00000627185 RUFY3Q7L099 469 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 FBXL16Q8N461 479 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 ZBTB3Q9H5J0 574 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 CYP46A1Q9Y6A2 500 aa10.15□□□□□ -0.78
CHD2-209ENST00000627185 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 ELP1O95163 1332 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 PCDH11XQ9BZA7 1347 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 PCDH11YQ9BZA8 1340 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
CHD2-209ENST00000627185 CIAO1O76071 339 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 ZSCAN22P10073 491 aaPredicted RBP10.14□□□□□ -0.79
CHD2-209ENST00000627185 PDCP20941 246 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 APLP1P51693 650 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 AK2P54819 239 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 PTPN12Q05209 780 aaKnown RBP10.14□□□□□ -0.79
CHD2-209ENST00000627185 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 MORN1Q5T089 497 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 THSD4Q6ZMP0 1018 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 COPS6Q7L5N1 327 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 AACSQ86V21 672 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 NFATC2IPQ8NCF5 419 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 BANK1Q8NDB2 785 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 CABLES1Q8TDN4 633 aa10.14□□□□□ -0.79
CHD2-209ENST00000627185 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms