RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 FAM177A1Q8N128 213 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 PLA2G12BQ9BX93 195 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 ATRNO75882 1429 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 ZKSCAN1P17029 563 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 KRT32Q14532 448 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 SMC3Q9UQE7 1217 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 CNPY2Q9Y2B0 182 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 BCORQ6W2J9 1755 aa8.53□□□□□ -1.04
CTNNA1-244ENST00000627109 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.04
CTNNA1-244ENST00000627109 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.04
CTNNA1-244ENST00000627109 DNTTIP2Q5QJE6 756 aaKnown RBP8.52□□□□□ -1.04
CTNNA1-244ENST00000627109 CERS3Q8IU89 383 aa8.52□□□□□ -1.04
CTNNA1-244ENST00000627109 CPA1P15085 419 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 EVCP57679 992 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 RNF20Q5VTR2 975 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 CCDC8Q9H0W5 538 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 TFCP2Q12800 502 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 ISCA1Q9BUE6 129 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 SIL1Q9H173 461 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 HELLSQ9NRZ9 838 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 TAF6LQ9Y6J9 622 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 CHD4Q14839 1912 aa8.52□□□□□ -1.05
CTNNA1-244ENST00000627109 PIP4K2AP48426 406 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 CCDC82Q8N4S0 544 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 KBTBD3Q8NAB2 608 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 CCDC191Q8NCU4 936 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 KLHDC4Q8TBB5 520 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 U3KPZ7 1027 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 DOT1LQ8TEK3 1739 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 MYL6BP14649 208 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 CCDC83Q8IWF9 413 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 GTF3C6Q969F1 213 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 RIC1Q4ADV7 1423 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 SRCAPQ6ZRS2 3230 aa8.51□□□□□ -1.05
CTNNA1-244ENST00000627109 PDCP20941 246 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 ATP6V1AP38606 617 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 EXOSC10Q01780 885 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 PIGBQ92521 554 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 LLPHQ9BRT6 129 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 BOLA2Q9H3K6 86 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 SLIT2O94813 1529 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 MYO5AQ9Y4I1 1855 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 BAG6P46379 1132 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 MCMDC2Q4G0Z9 681 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 FSD1Q9BTV5 496 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 NAP1L2Q9ULW6 460 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 VPS37CA5D8V6 355 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 NPHP1O15259 732 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 TPM2P07951 284 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 BLOC1S2Q6QNY1 142 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
CTNNA1-244ENST00000627109 FIBPO43427 364 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 IL15P40933 162 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CDHR2Q9BYE9 1310 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 A0A087WZG4 1122 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CSF1RP07333 972 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 GLIPR1L2Q4G1C9 344 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CNPY4Q8N129 248 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 DBNDD2Q9BQY9 259 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 PFKFB2O60825 505 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CYP21A2P08686 494 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 RESTQ13127 1097 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 IFNLR1Q8IU57 520 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 CWC25Q9NXE8 425 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
CTNNA1-244ENST00000627109 DNM1Q05193 864 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 STOX1Q6ZVD7 989 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 CDC37L1Q7L3B6 337 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 TTC6Q86TZ1 520 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 WDR19Q8NEZ3 1342 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 KIAA1551Q9HCM1 1747 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 FOXP2O15409 715 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 EYA2O00167 538 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 SMIM5Q71RC9 77 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 NEK1Q96PY6 1258 aa8.48□□□□□ -1.05
CTNNA1-244ENST00000627109 GOLGA6L4A6NEF3 574 aa8.47□□□□□ -1.05
CTNNA1-244ENST00000627109 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
CTNNA1-244ENST00000627109 TFCP2L1Q9NZI6 479 aa8.47□□□□□ -1.05
CTNNA1-244ENST00000627109 USP25Q9UHP3 1055 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms