RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 MPHOSPH8Q99549 860 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 SH2B1Q9NRF2 756 aaPredicted RBP23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 MYH7P12883 1935 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 KRT32Q14532 448 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 PUM3Q15397 648 aaKnown RBP23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 CCDC102BQ68D86 513 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 BICDL1Q6ZP65 573 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 STOX1Q6ZVD7 989 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 SMC3Q9UQE7 1217 aa23.44■■□□□ 1.34
CHRNA4-209ENST00000627000 MYO5AQ9Y4I1 1855 aaKnown RBP23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 AFF2P51816 1311 aa23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 WASHC4Q2M389 1173 aa23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 ERFEQ4G0M1 354 aa23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 BCL2L12Q9HB09 334 aa23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
CHRNA4-209ENST00000627000 LPIN2Q92539 896 aa23.42■■□□□ 1.34
CHRNA4-209ENST00000627000 C3orf67Q6ZVT6 689 aa23.42■■□□□ 1.34
CHRNA4-209ENST00000627000 ARAP2Q8WZ64 1704 aa23.42■■□□□ 1.34
CHRNA4-209ENST00000627000 ZNF512BQ96KM6 892 aaPredicted RBP23.42■■□□□ 1.34
CHRNA4-209ENST00000627000 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
CHRNA4-209ENST00000627000 TBC1D9BQ66K14 1250 aa23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 SRP68Q9UHB9 627 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 DDX49Q9Y6V7 483 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 SCN7AQ01118 1682 aa23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 PRPF40AO75400 957 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 ZFYP08048 801 aaPredicted RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 LRRFIP1Q32MZ4 808 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 PIH1D3Q9NQM4 214 aaKnown RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 CCNL1Q9UK58 526 aaPredicted RBP23.41■■□□□ 1.34
CHRNA4-209ENST00000627000 GJB2P29033 226 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 FOXD4L6Q3SYB3 417 aaPredicted RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 FOXD4L3Q6VB84 417 aaPredicted RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 RTL9Q8NET4 1388 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 WDR33Q9C0J8 1336 aaKnown RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 GNPATO15228 680 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 FOXP2O15409 715 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 RPS6KA4O75676 772 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 SYT1P21579 422 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 ARID4AP29374 1257 aaPredicted RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 ANKRD1Q15327 319 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 RC3H1Q5TC82 1133 aaKnown RBP23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 TTLL5Q6EMB2 1281 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 APPBP2Q92624 585 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 TAF1P21675 1872 aa23.4■■□□□ 1.34
CHRNA4-209ENST00000627000 SBF2Q86WG5 1849 aa23.39■■□□□ 1.34
CHRNA4-209ENST00000627000 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
CHRNA4-209ENST00000627000 SLC5A1P13866 664 aa23.38■■□□□ 1.33
CHRNA4-209ENST00000627000 KLHL40Q2TBA0 621 aa23.38■■□□□ 1.33
CHRNA4-209ENST00000627000 Q6ZUG5 572 aa23.38■■□□□ 1.33
CHRNA4-209ENST00000627000 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
CHRNA4-209ENST00000627000 NARFQ9UHQ1 456 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 FSD2A1L4K1 749 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 STX6O43752 255 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 UQCRFS1P1P0C7P4 283 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 ADD2P35612 726 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 STK3Q13188 491 aa23.37■■□□□ 1.33
CHRNA4-209ENST00000627000 TAF1LQ8IZX4 1826 aa23.36■■□□□ 1.33
CHRNA4-209ENST00000627000 LY75O60449 1722 aa23.36■■□□□ 1.33
CHRNA4-209ENST00000627000 CHRNDQ07001 517 aa23.36■■□□□ 1.33
CHRNA4-209ENST00000627000 GOLGA6L3A6NEY3 463 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 IDH1O75874 414 aaKnown RBP23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 ATRNO75882 1429 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 E7EWF7 191 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 GPAA1O43292 621 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 ZSCAN22P10073 491 aaPredicted RBP23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 TTF1Q15361 905 aaPredicted RBP23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 TCHHQ07283 1943 aa23.35■■□□□ 1.33
CHRNA4-209ENST00000627000 NCLP19338 710 aaKnown RBP23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 RASGRF1Q13972 1273 aa23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 GPT2Q8TD30 523 aa23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 GTF2E1P29083 439 aaPredicted RBP23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 SF3B3Q15393 1217 aaKnown RBP23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 SPATA5Q8NB90 893 aa23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 WWC3Q9ULE0 1092 aa23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 RTCBQ9Y3I0 505 aaKnown RBP23.34■■□□□ 1.33
CHRNA4-209ENST00000627000 BCAMP50895 628 aa23.33■■□□□ 1.33
CHRNA4-209ENST00000627000 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
CHRNA4-209ENST00000627000 CDC5LQ99459 802 aaKnown RBP23.33■■□□□ 1.33
CHRNA4-209ENST00000627000 TRPC5Q9UL62 973 aaPredicted RBP23.33■■□□□ 1.33
CHRNA4-209ENST00000627000 ZPR1O75312 459 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 FGAP02671 866 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 HAND2P61296 217 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 ZSCAN25Q6NSZ9 544 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 DHX32Q7L7V1 743 aaKnown RBP23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 CCDC24Q8N4L8 307 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 BRF1Q92994 677 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 GDPD2Q9HCC8 539 aa23.33■■□□□ 1.32
CHRNA4-209ENST00000627000 ZNF532Q9HCE3 1301 aa23.32■■□□□ 1.32
CHRNA4-209ENST00000627000 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
CHRNA4-209ENST00000627000 WTIPA6NIX2 430 aaPredicted RBP23.31■■□□□ 1.32
CHRNA4-209ENST00000627000 HMGB1P09429 215 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms