RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 UBE4AQ14139 1066 aa20.92■□□□□ 0.94
UBE3D-208ENST00000626828 USP17L1Q7RTZ2 530 aa20.92■□□□□ 0.94
UBE3D-208ENST00000626828 ZBTB12Q9Y330 459 aaPredicted RBP20.92■□□□□ 0.94
UBE3D-208ENST00000626828 SNAP23O00161 211 aa20.91■□□□□ 0.94
UBE3D-208ENST00000626828 MS4A1P11836 297 aa20.91■□□□□ 0.94
UBE3D-208ENST00000626828 RFX5P48382 616 aaPredicted RBP20.91■□□□□ 0.94
UBE3D-208ENST00000626828 LRRC24Q50LG9 513 aa20.91■□□□□ 0.94
UBE3D-208ENST00000626828 GNAI2P04899 355 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 APLP1P51693 650 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
UBE3D-208ENST00000626828 AGBL3Q8NEM8 1001 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 KLHDC4Q8TBB5 520 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
UBE3D-208ENST00000626828 SCN9AQ15858 1988 aa20.89■□□□□ 0.93
UBE3D-208ENST00000626828 EYA2O00167 538 aa20.89■□□□□ 0.93
UBE3D-208ENST00000626828 KLRK1P26718 216 aa20.89■□□□□ 0.93
UBE3D-208ENST00000626828 METTL24Q5JXM2 366 aa20.89■□□□□ 0.93
UBE3D-208ENST00000626828 RSBN1LQ6PCB5 846 aaPredicted RBP20.89■□□□□ 0.93
UBE3D-208ENST00000626828 CD209Q9NNX6 404 aa20.89■□□□□ 0.93
UBE3D-208ENST00000626828 PDE8BO95263 885 aa20.88■□□□□ 0.93
UBE3D-208ENST00000626828 STRIP1Q5VSL9 837 aa20.88■□□□□ 0.93
UBE3D-208ENST00000626828 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
UBE3D-208ENST00000626828 ZNF804AQ7Z570 1209 aa20.88■□□□□ 0.93
UBE3D-208ENST00000626828 MICALL2Q8IY33 904 aa20.88■□□□□ 0.93
UBE3D-208ENST00000626828 IRS2Q9Y4H2 1338 aa20.87■□□□□ 0.93
UBE3D-208ENST00000626828 CNTROBQ8N137 903 aa20.87■□□□□ 0.93
UBE3D-208ENST00000626828 CIAO1O76071 339 aa20.86■□□□□ 0.93
UBE3D-208ENST00000626828 MTX1Q13505 466 aa20.86■□□□□ 0.93
UBE3D-208ENST00000626828 ITPRIPQ8IWB1 547 aa20.86■□□□□ 0.93
UBE3D-208ENST00000626828 ZC3H15Q8WU90 426 aaKnown RBP20.86■□□□□ 0.93
UBE3D-208ENST00000626828 GMLQ99445 158 aa20.86■□□□□ 0.93
UBE3D-208ENST00000626828 COPRSQ9NQ92 184 aa20.86■□□□□ 0.93
UBE3D-208ENST00000626828 ZBTB7BO15156 539 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-208ENST00000626828 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 ITGBL1O95965 494 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-208ENST00000626828 RLBP1P12271 317 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 IL1R1P14778 569 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 DACT2Q5SW24 774 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 MAP1SQ66K74 1059 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-208ENST00000626828 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
UBE3D-208ENST00000626828 MYO3BQ8WXR4 1341 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 USP17L8P0C7I0 530 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 HIBADHP31937 336 aaKnown RBP20.84■□□□□ 0.93
UBE3D-208ENST00000626828 MMP14P50281 582 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 HIRAP54198 1017 aaPredicted RBP20.84■□□□□ 0.93
UBE3D-208ENST00000626828 GTF2IP78347 998 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 ATG9AQ7Z3C6 839 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 SAMD7Q7Z3H4 446 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 FAM84BQ96KN1 310 aaPredicted RBP20.84■□□□□ 0.93
UBE3D-208ENST00000626828 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
UBE3D-208ENST00000626828 SHTN1A0MZ66 631 aa20.83■□□□□ 0.93
UBE3D-208ENST00000626828 SASH1O94885 1247 aa20.83■□□□□ 0.93
UBE3D-208ENST00000626828 IL15P40933 162 aaPredicted RBP20.83■□□□□ 0.93
UBE3D-208ENST00000626828 CAVIN4Q5BKX8 364 aa20.83■□□□□ 0.93
UBE3D-208ENST00000626828 RBM26Q5T8P6 1007 aaKnown RBP20.83■□□□□ 0.93
UBE3D-208ENST00000626828 SIL1Q9H173 461 aa20.83■□□□□ 0.93
UBE3D-208ENST00000626828 IFIT1P09914 478 aaKnown RBP20.82■□□□□ 0.92
UBE3D-208ENST00000626828 ZNF280AP59817 542 aaPredicted RBP20.82■□□□□ 0.92
UBE3D-208ENST00000626828 PUM3Q15397 648 aaKnown RBP20.82■□□□□ 0.92
UBE3D-208ENST00000626828 TBC1D10BQ4KMP7 808 aaPredicted RBP20.82■□□□□ 0.92
UBE3D-208ENST00000626828 FBXO33Q7Z6M2 555 aa20.82■□□□□ 0.92
UBE3D-208ENST00000626828 OGFOD1Q8N543 542 aa20.82■□□□□ 0.92
UBE3D-208ENST00000626828 TRPM4Q8TD43 1214 aa20.82■□□□□ 0.92
UBE3D-208ENST00000626828 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
UBE3D-208ENST00000626828 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
UBE3D-208ENST00000626828 PSME4Q14997 1843 aa20.82■□□□□ 0.92
UBE3D-208ENST00000626828 ZNF609O15014 1411 aa20.81■□□□□ 0.92
UBE3D-208ENST00000626828 GYG1P46976 350 aa20.81■□□□□ 0.92
UBE3D-208ENST00000626828 ATP8B2P98198 1209 aa20.81■□□□□ 0.92
UBE3D-208ENST00000626828 VPS37DQ86XT2 251 aa20.81■□□□□ 0.92
UBE3D-208ENST00000626828 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
UBE3D-208ENST00000626828 TDRD7Q8NHU6 1098 aaKnown RBP20.81■□□□□ 0.92
UBE3D-208ENST00000626828 A0A1B0GUL6 1792 aa20.81■□□□□ 0.92
UBE3D-208ENST00000626828 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
UBE3D-208ENST00000626828 ADAMTSL1Q8N6G6 1762 aa20.8■□□□□ 0.92
UBE3D-208ENST00000626828 FGFR2P21802 821 aa20.8■□□□□ 0.92
UBE3D-208ENST00000626828 LPIN2Q92539 896 aa20.8■□□□□ 0.92
UBE3D-208ENST00000626828 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
UBE3D-208ENST00000626828 MXD3Q9BW11 206 aa20.8■□□□□ 0.92
UBE3D-208ENST00000626828 SLC5A1P13866 664 aa20.79■□□□□ 0.92
UBE3D-208ENST00000626828 FKBP1AP62942 108 aaKnown RBP20.79■□□□□ 0.92
UBE3D-208ENST00000626828 KIF4BQ2VIQ3 1234 aa20.79■□□□□ 0.92
UBE3D-208ENST00000626828 POLR2AP24928 1970 aaKnown RBP20.79■□□□□ 0.92
UBE3D-208ENST00000626828 PNMA6EA0A0J9YXQ4 647 aa20.78■□□□□ 0.92
UBE3D-208ENST00000626828 G3BP1Q13283 466 aaKnown RBP eCLIP20.78■□□□□ 0.92
UBE3D-208ENST00000626828 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
UBE3D-208ENST00000626828 CHMP4BQ9H444 224 aaKnown RBP20.78■□□□□ 0.92
UBE3D-208ENST00000626828 MYOZ2Q9NPC6 264 aa20.78■□□□□ 0.92
UBE3D-208ENST00000626828 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
UBE3D-208ENST00000626828 FAM205AQ6ZU69 1335 aa20.78■□□□□ 0.92
UBE3D-208ENST00000626828 EGFRP00533 1210 aa20.77■□□□□ 0.92
UBE3D-208ENST00000626828 BCAMP50895 628 aa20.77■□□□□ 0.92
UBE3D-208ENST00000626828 PDE3AQ14432 1141 aa20.77■□□□□ 0.92
UBE3D-208ENST00000626828 DNAJC5GQ8N7S2 189 aa20.77■□□□□ 0.92
UBE3D-208ENST00000626828 DCPSQ96C86 337 aaKnown RBP20.77■□□□□ 0.92
UBE3D-208ENST00000626828 CREBZFQ9NS37 354 aa20.77■□□□□ 0.92
UBE3D-208ENST00000626828 DDX19BQ9UMR2 479 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms