RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	SPEF2	Q9C093	1822 aa		32.3	■■■□□ 2.76
R3HDM4-208	ENST00000626716	MED23	Q9ULK4	1368 aa		32.3	■■■□□ 2.76
R3HDM4-208	ENST00000626716	PLA2G12B	Q9BX93	195 aa		32.29	■■■□□ 2.76
R3HDM4-208	ENST00000626716	IGHMBP2	P38935	993 aa	Known RBP	32.28	■■■□□ 2.76
R3HDM4-208	ENST00000626716	MRS2	Q9HD23	443 aa		32.28	■■■□□ 2.76
R3HDM4-208	ENST00000626716	LEMD3	Q9Y2U8	911 aa		32.28	■■■□□ 2.76
R3HDM4-208	ENST00000626716	DNAAF4	Q8WXU2	420 aa		32.27	■■■□□ 2.76
R3HDM4-208	ENST00000626716	MYH16	Q9H6N6	1097 aa		32.27	■■■□□ 2.76
R3HDM4-208	ENST00000626716	KIF23	Q02241	960 aa	Predicted RBP	32.26	■■■□□ 2.75
R3HDM4-208	ENST00000626716	FKBP5	Q13451	457 aa	Predicted RBP	32.26	■■■□□ 2.75
R3HDM4-208	ENST00000626716	COA1	Q9GZY4	146 aa		32.26	■■■□□ 2.75
R3HDM4-208	ENST00000626716	PITPNM2	Q9BZ72	1349 aa		32.26	■■■□□ 2.75
R3HDM4-208	ENST00000626716	FANCI	Q9NVI1	1328 aa		32.26	■■■□□ 2.75
R3HDM4-208	ENST00000626716	ITGA6	P23229	1130 aa		32.25	■■■□□ 2.75
R3HDM4-208	ENST00000626716	WDR63	Q8IWG1	891 aa		32.25	■■■□□ 2.75
R3HDM4-208	ENST00000626716	LINS1	Q8NG48	757 aa		32.25	■■■□□ 2.75
R3HDM4-208	ENST00000626716	CCDC85C	A6NKD9	419 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	VAMP4	O75379	141 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	CSF1R	P07333	972 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	CASP7	P55210	303 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	DACT2	Q5SW24	774 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	ANKRD2	Q9GZV1	360 aa		32.24	■■■□□ 2.75
R3HDM4-208	ENST00000626716	STRIP1	Q5VSL9	837 aa		32.23	■■■□□ 2.75
R3HDM4-208	ENST00000626716	TXNRD3	Q86VQ6	643 aa		32.23	■■■□□ 2.75
R3HDM4-208	ENST00000626716	OGFOD1	Q8N543	542 aa		32.23	■■■□□ 2.75
R3HDM4-208	ENST00000626716	MPHOSPH8	Q99549	860 aa		32.23	■■■□□ 2.75
R3HDM4-208	ENST00000626716	SALL2	Q9Y467	1007 aa	Predicted RBP	32.23	■■■□□ 2.75
R3HDM4-208	ENST00000626716	MXD3	Q9BW11	206 aa		32.22	■■■□□ 2.75
R3HDM4-208	ENST00000626716	SLC10A3	P09131	477 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	FKBP1B	P68106	108 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	FAM161A	Q3B820	660 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	FBXW7	Q969H0	707 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	MCOLN1	Q9GZU1	580 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	SAGE1	Q9NXZ1	904 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	ZNF804B	A4D1E1	1349 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	MYO3B	Q8WXR4	1341 aa		32.21	■■■□□ 2.75
R3HDM4-208	ENST00000626716	ANP32C	O43423	234 aa		32.2	■■■□□ 2.75
R3HDM4-208	ENST00000626716	NBPF9	Q3BBW0	867 aa		32.2	■■■□□ 2.75
R3HDM4-208	ENST00000626716	EXOSC9	Q06265	439 aa	Known RBP	32.19	■■■□□ 2.74
R3HDM4-208	ENST00000626716	AKAP11	Q9UKA4	1901 aa		32.19	■■■□□ 2.74
R3HDM4-208	ENST00000626716	MMP14	P50281	582 aa		32.18	■■■□□ 2.74
R3HDM4-208	ENST00000626716	TTLL5	Q6EMB2	1281 aa		32.18	■■■□□ 2.74
R3HDM4-208	ENST00000626716	CSRNP1	Q96S65	589 aa		32.18	■■■□□ 2.74
R3HDM4-208	ENST00000626716	SCAF8	Q9UPN6	1271 aa	Known RBP	32.18	■■■□□ 2.74
R3HDM4-208	ENST00000626716	DGKZ	Q13574	1117 aa		32.17	■■■□□ 2.74
R3HDM4-208	ENST00000626716	RNF186	Q9NXI6	227 aa		32.17	■■■□□ 2.74
R3HDM4-208	ENST00000626716	ANKRD18B	A2A2Z9	1011 aa		32.16	■■■□□ 2.74
R3HDM4-208	ENST00000626716	TRPA1	O75762	1119 aa		32.16	■■■□□ 2.74
R3HDM4-208	ENST00000626716	KLRK1	P26718	216 aa		32.16	■■■□□ 2.74
R3HDM4-208	ENST00000626716	REM2	Q8IYK8	340 aa	Predicted RBP	32.16	■■■□□ 2.74
R3HDM4-208	ENST00000626716	ZNF646	O15015	1829 aa	Predicted RBP	32.15	■■■□□ 2.74
R3HDM4-208	ENST00000626716	WNT10B	O00744	389 aa		32.15	■■■□□ 2.74
R3HDM4-208	ENST00000626716	ZEB1	P37275	1124 aa	Predicted RBP	32.15	■■■□□ 2.74
R3HDM4-208	ENST00000626716	KCNJ4	P48050	445 aa		32.15	■■■□□ 2.74
R3HDM4-208	ENST00000626716	CHRND	Q07001	517 aa		32.15	■■■□□ 2.74
R3HDM4-208	ENST00000626716	PAPPA2	Q9BXP8	1791 aa		32.14	■■■□□ 2.74
R3HDM4-208	ENST00000626716	PRAMEF18	Q5VWM3	479 aa		32.14	■■■□□ 2.74
R3HDM4-208	ENST00000626716	RASAL3	Q86YV0	1011 aa		32.14	■■■□□ 2.74
R3HDM4-208	ENST00000626716		F6X3S4	739 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	RGS19	P49795	217 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	GTF2I	P78347	998 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	FOXO4	P98177	505 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	IFIT5	Q13325	482 aa	Known RBP	32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	BEND3	Q5T5X7	828 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	MOB2	Q70IA6	237 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	HDAC9	Q9UKV0	1011 aa		32.12	■■■□□ 2.73
R3HDM4-208	ENST00000626716	UBE2Q2L	H0YL09	131 aa		32.11	■■■□□ 2.73
R3HDM4-208	ENST00000626716	KIAA0825	Q8IV33	1275 aa		32.1	■■■□□ 2.73
R3HDM4-208	ENST00000626716	CD209	Q9NNX6	404 aa		32.1	■■■□□ 2.73
R3HDM4-208	ENST00000626716	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.1	■■■□□ 2.73
R3HDM4-208	ENST00000626716	TAF5L	O75529	589 aa		32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	SASH1	O94885	1247 aa		32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	NF2	P35240	595 aa		32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	TTLL12	Q14166	644 aa	Predicted RBP	32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	HELB	Q8NG08	1087 aa	Predicted RBP	32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	CHMP3	Q9Y3E7	222 aa		32.08	■■■□□ 2.73
R3HDM4-208	ENST00000626716	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.07	■■■□□ 2.72
R3HDM4-208	ENST00000626716	SNAP23	O00161	211 aa		32.07	■■■□□ 2.72
R3HDM4-208	ENST00000626716	MLLT1	Q03111	559 aa	Predicted RBP	32.07	■■■□□ 2.72
R3HDM4-208	ENST00000626716	C15orf52	Q6ZUT6	534 aa	Known RBP	32.07	■■■□□ 2.72
R3HDM4-208	ENST00000626716	IRS2	Q9Y4H2	1338 aa		32.05	■■■□□ 2.72
R3HDM4-208	ENST00000626716	LMBR1L	Q6UX01	489 aa		32.05	■■■□□ 2.72
R3HDM4-208	ENST00000626716	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.05	■■■□□ 2.72
R3HDM4-208	ENST00000626716	ZBED3	Q96IU2	234 aa	Predicted RBP	32.05	■■■□□ 2.72
R3HDM4-208	ENST00000626716	GRM8	O00222	908 aa		32.03	■■■□□ 2.72
R3HDM4-208	ENST00000626716	CCDC57	Q2TAC2	916 aa		32.03	■■■□□ 2.72
R3HDM4-208	ENST00000626716	EPHA10	Q5JZY3	1008 aa		32.02	■■■□□ 2.72
R3HDM4-208	ENST00000626716	IL1R1	P14778	569 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	DLGAP5	Q15398	846 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	LDHAL6A	Q6ZMR3	332 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	ZNF804A	Q7Z570	1209 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	FAM9B	Q8IZU0	186 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	CERS5	Q8N5B7	392 aa		32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.01	■■■□□ 2.71
R3HDM4-208	ENST00000626716	TAF7L	Q5H9L4	462 aa		32	■■■□□ 2.71
R3HDM4-208	ENST00000626716	ARMC9	Q7Z3E5	817 aa		32	■■■□□ 2.71
R3HDM4-208	ENST00000626716	ZNF594	Q96JF6	807 aa	Predicted RBP	32	■■■□□ 2.71
R3HDM4-208	ENST00000626716	ALDH1L1	O75891	902 aa		31.99	■■■□□ 2.71
R3HDM4-208	ENST00000626716	MTMR14	Q8NCE2	650 aa		31.99	■■■□□ 2.71
R3HDM4-208	ENST00000626716	PLIN1	O60240	522 aa		31.98	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms