RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ANKRD44Q8N8A2 993 aa28.06■■■□□ 2.08
SF1-220ENST00000626028 WTIPA6NIX2 430 aaPredicted RBP28.05■■■□□ 2.08
SF1-220ENST00000626028 STRIP1Q5VSL9 837 aa28.05■■■□□ 2.08
SF1-220ENST00000626028 MYO3BQ8WXR4 1341 aa28.05■■■□□ 2.08
SF1-220ENST00000626028 MROH5Q6ZUA9 1318 aa28.04■■■□□ 2.08
SF1-220ENST00000626028 TMEM88BA6NKF7 163 aa28.04■■■□□ 2.08
SF1-220ENST00000626028 INTS3Q68E01 1043 aaKnown RBP28.04■■■□□ 2.08
SF1-220ENST00000626028 ZNF594Q96JF6 807 aaPredicted RBP28.04■■■□□ 2.08
SF1-220ENST00000626028 IRS2Q9Y4H2 1338 aa28.03■■■□□ 2.08
SF1-220ENST00000626028 UBTFL1P0CB47 393 aaPredicted RBP28.03■■■□□ 2.08
SF1-220ENST00000626028 HTRA3P83110 453 aa28.03■■■□□ 2.08
SF1-220ENST00000626028 TXNRD3Q86VQ6 643 aa28.03■■■□□ 2.08
SF1-220ENST00000626028 GMLQ99445 158 aa28.03■■■□□ 2.08
SF1-220ENST00000626028 HIRAP54198 1017 aaPredicted RBP28.02■■■□□ 2.08
SF1-220ENST00000626028 ZNF280AP59817 542 aaPredicted RBP28.02■■■□□ 2.08
SF1-220ENST00000626028 JMYQ8N9B5 988 aa28.02■■■□□ 2.08
SF1-220ENST00000626028 RIPOR2Q9Y4F9 1068 aa28.02■■■□□ 2.08
SF1-220ENST00000626028 TAF5LO75529 589 aa28.01■■■□□ 2.07
SF1-220ENST00000626028 UBE4AQ14139 1066 aa28.01■■■□□ 2.07
SF1-220ENST00000626028 ATF7IPQ6VMQ6 1270 aa28.01■■■□□ 2.07
SF1-220ENST00000626028 TRPM4Q8TD43 1214 aa28.01■■■□□ 2.07
SF1-220ENST00000626028 USP17L8P0C7I0 530 aa28■■■□□ 2.07
SF1-220ENST00000626028 DACT2Q5SW24 774 aa28■■■□□ 2.07
SF1-220ENST00000626028 ZNF804AQ7Z570 1209 aa28■■■□□ 2.07
SF1-220ENST00000626028 HELBQ8NG08 1087 aaPredicted RBP28■■■□□ 2.07
SF1-220ENST00000626028 CDC37L1Q7L3B6 337 aa27.99■■■□□ 2.07
SF1-220ENST00000626028 CD209Q9NNX6 404 aa27.99■■■□□ 2.07
SF1-220ENST00000626028 SHTN1A0MZ66 631 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 GNAI3P08754 354 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 TRIM27P14373 513 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 KLRK1P26718 216 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 TTLL5Q6EMB2 1281 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 SAMD7Q7Z3H4 446 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 FBXO3Q9UK99 471 aa27.98■■■□□ 2.07
SF1-220ENST00000626028 BCAR3O75815 825 aa27.97■■■□□ 2.07
SF1-220ENST00000626028 IL1R1P14778 569 aa27.97■■■□□ 2.07
SF1-220ENST00000626028 KIF4BQ2VIQ3 1234 aa27.97■■■□□ 2.07
SF1-220ENST00000626028 PCNTO95613 3336 aa27.96■■■□□ 2.07
SF1-220ENST00000626028 TBC1D10BQ4KMP7 808 aaPredicted RBP27.96■■■□□ 2.07
SF1-220ENST00000626028 OGFOD1Q8N543 542 aa27.96■■■□□ 2.07
SF1-220ENST00000626028 PUS3Q9BZE2 481 aaKnown RBP27.96■■■□□ 2.07
SF1-220ENST00000626028 PLIN1O60240 522 aa27.95■■■□□ 2.06
SF1-220ENST00000626028 ZKSCAN2Q63HK3 967 aa27.95■■■□□ 2.06
SF1-220ENST00000626028 CNTNAP1P78357 1384 aa27.95■■■□□ 2.06
SF1-220ENST00000626028 SNAP23O00161 211 aa27.94■■■□□ 2.06
SF1-220ENST00000626028 FKBP1AP62942 108 aaKnown RBP27.94■■■□□ 2.06
SF1-220ENST00000626028 FRAT1Q92837 279 aaPredicted RBP27.94■■■□□ 2.06
SF1-220ENST00000626028 ECM29Q5VYK3 1845 aa27.94■■■□□ 2.06
SF1-220ENST00000626028 PDE8BO95263 885 aa27.93■■■□□ 2.06
SF1-220ENST00000626028 EGFRP00533 1210 aa27.93■■■□□ 2.06
SF1-220ENST00000626028 RFX5P48382 616 aaPredicted RBP27.93■■■□□ 2.06
SF1-220ENST00000626028 METTL24Q5JXM2 366 aa27.93■■■□□ 2.06
SF1-220ENST00000626028 DCPSQ96C86 337 aaKnown RBP27.93■■■□□ 2.06
SF1-220ENST00000626028 MYOZ2Q9NPC6 264 aa27.93■■■□□ 2.06
SF1-220ENST00000626028 ARAP2Q8WZ64 1704 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 GTF2IP78347 998 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 VGLL2Q8N8G2 317 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 MEIS3Q99687 375 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 LRRFIP2Q9Y608 721 aaKnown RBP27.92■■■□□ 2.06
SF1-220ENST00000626028 MYH13Q9UKX3 1938 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 PITPNM2Q9BZ72 1349 aa27.92■■■□□ 2.06
SF1-220ENST00000626028 RASSF10A6NK89 507 aa27.91■■■□□ 2.06
SF1-220ENST00000626028 EYA2O00167 538 aa27.91■■■□□ 2.06
SF1-220ENST00000626028 SASH1O94885 1247 aa27.91■■■□□ 2.06
SF1-220ENST00000626028 PTPN12Q05209 780 aaKnown RBP27.91■■■□□ 2.06
SF1-220ENST00000626028 LRRC24Q50LG9 513 aa27.91■■■□□ 2.06
SF1-220ENST00000626028 GLIS2Q9BZE0 524 aaPredicted RBP27.91■■■□□ 2.06
SF1-220ENST00000626028 TRAF5O00463 557 aa27.9■■■□□ 2.06
SF1-220ENST00000626028 CIAO1O76071 339 aa27.9■■■□□ 2.06
SF1-220ENST00000626028 RBM26Q5T8P6 1007 aaKnown RBP27.9■■■□□ 2.06
SF1-220ENST00000626028 CST9Q5W186 159 aa27.9■■■□□ 2.06
SF1-220ENST00000626028 FBXW7Q969H0 707 aa27.9■■■□□ 2.06
SF1-220ENST00000626028 HDAC9Q9UKV0 1011 aa27.9■■■□□ 2.06
SF1-220ENST00000626028 HIBADHP31937 336 aaKnown RBP27.89■■■□□ 2.06
SF1-220ENST00000626028 MTX1Q13505 466 aa27.89■■■□□ 2.06
SF1-220ENST00000626028 KRT26Q7Z3Y9 468 aa27.89■■■□□ 2.06
SF1-220ENST00000626028 TDRD7Q8NHU6 1098 aaKnown RBP27.89■■■□□ 2.06
SF1-220ENST00000626028 FAM205AQ6ZU69 1335 aa27.89■■■□□ 2.05
SF1-220ENST00000626028 PUM3Q15397 648 aaKnown RBP27.88■■■□□ 2.05
SF1-220ENST00000626028 DEFB115Q30KQ5 88 aa27.88■■■□□ 2.05
SF1-220ENST00000626028 SULF1Q8IWU6 871 aa27.88■■■□□ 2.05
SF1-220ENST00000626028 KLHDC4Q8TBB5 520 aa27.88■■■□□ 2.05
SF1-220ENST00000626028 FAM84BQ96KN1 310 aaPredicted RBP27.88■■■□□ 2.05
SF1-220ENST00000626028 SCARF1Q14162 830 aa27.87■■■□□ 2.05
SF1-220ENST00000626028 CAVIN4Q5BKX8 364 aa27.87■■■□□ 2.05
SF1-220ENST00000626028 HHIPL1Q96JK4 782 aa27.87■■■□□ 2.05
SF1-220ENST00000626028 GGA3Q9NZ52 723 aa27.87■■■□□ 2.05
SF1-220ENST00000626028 MKRN1Q9UHC7 482 aaKnown RBP27.87■■■□□ 2.05
SF1-220ENST00000626028 ABT1Q9ULW3 272 aaKnown RBP27.87■■■□□ 2.05
SF1-220ENST00000626028 COPRSQ9NQ92 184 aa27.86■■■□□ 2.05
SF1-220ENST00000626028 TLL2Q9Y6L7 1015 aa27.86■■■□□ 2.05
SF1-220ENST00000626028 CELF2O95319 508 aaKnown RBP27.85■■■□□ 2.05
SF1-220ENST00000626028 FBXO33Q7Z6M2 555 aa27.85■■■□□ 2.05
SF1-220ENST00000626028 USP48Q86UV5 1035 aa27.85■■■□□ 2.05
SF1-220ENST00000626028 VPS37DQ86XT2 251 aa27.85■■■□□ 2.05
SF1-220ENST00000626028 MXD3Q9BW11 206 aa27.85■■■□□ 2.05
SF1-220ENST00000626028 GNAI2P04899 355 aa27.84■■■□□ 2.05
SF1-220ENST00000626028 IFIT1P09914 478 aaKnown RBP27.84■■■□□ 2.05
SF1-220ENST00000626028 FGFR2P21802 821 aa27.84■■■□□ 2.05
SF1-220ENST00000626028 IL15P40933 162 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms