RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-221ENST00000625705 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 C21orf2O43822 256 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 PCCAP05165 728 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 KCNA3P22001 575 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 YY1P25490 414 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 SOGA3Q5TF21 947 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 SYNE4Q8N205 404 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 JARID2Q92833 1246 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 C9orf78Q9NZ63 289 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 DDX60Q8IY21 1712 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 CHD4Q14839 1912 aa9.13□□□□□ -0.95
NPLOC4-221ENST00000625705 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 IPO8O15397 1037 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 PDE8AO60658 829 aa9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 IGKV5-2P06315 115 aa9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 API5Q9BZZ5 524 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 CHMP3Q9Y3E7 222 aa9.12□□□□□ -0.95
NPLOC4-221ENST00000625705 SLX4Q8IY92 1834 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 RARSP54136 660 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 PLCB2Q00722 1185 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 GCKRQ14397 625 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 CCDC152Q4G0S7 254 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 SLC10A5Q5PT55 438 aa9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 CCDC85AQ96PX6 553 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-221ENST00000625705 CDHR2Q9BYE9 1310 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 MYH3P11055 1940 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 GRM8O00222 908 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 ALDH1L1O75891 902 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 CTSWP56202 376 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 RASSF7Q02833 373 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 BEND3Q5T5X7 828 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 CRAMP1Q96RY5 1269 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 RNF181Q9P0P0 153 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
NPLOC4-221ENST00000625705 ABCC4O15439 1325 aa9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 KLRG2A4D1S0 409 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 HOXA10P31260 410 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 CCT4P50991 539 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 GRAPQ13588 217 aa9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 FTSJ3Q8IY81 847 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 RTKN2Q8IZC4 609 aa9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 GRAPLQ8TC17 118 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 CDC5LQ99459 802 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-221ENST00000625705 SPEF2Q9C093 1822 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 BCAR3O75815 825 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 BBOX1O75936 387 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 LMNB1P20700 586 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 C9orf131Q5VYM1 1079 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 ZKSCAN2Q63HK3 967 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 TMC4Q7Z404 712 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 ANKRD18AQ8IVF6 992 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 ZNF526Q8TF50 670 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
NPLOC4-221ENST00000625705 H7C1W4 665 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 UBTFL1P0CB47 393 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 OSBPP22059 807 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 IGHMBP2P38935 993 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 PRSS12P56730 875 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 GRIPAP1Q4V328 841 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 OLFM4Q6UX06 510 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 ATF7IPQ6VMQ6 1270 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 RCAN3Q9UKA8 241 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 HDAC5Q9UQL6 1122 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 TIAM2Q8IVF5 1701 aa9.07□□□□□ -0.96
NPLOC4-221ENST00000625705 TAF1P21675 1872 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 NFKBIEO00221 500 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 TRIM27P14373 513 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 RPS8P62241 208 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 FKBP4Q02790 459 aaKnown RBP eCLIP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 IFIT5Q13325 482 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 CCDC57Q2TAC2 916 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 MPNDQ8N594 471 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 SUPT20HQ8NEM7 779 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 CELF1Q92879 486 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 MPHOSPH8Q99549 860 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 GREM2Q9H772 168 aa9.06□□□□□ -0.96
NPLOC4-221ENST00000625705 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms