RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 FBXW7Q969H0 707 aa18.53■□□□□ 0.56
TUBB3-215ENST00000625617 IL16Q14005 1332 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 MYO3BQ8WXR4 1341 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 FLIIQ13045 1269 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 RASAL3Q86YV0 1011 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 OGFOD1Q8N543 542 aa18.52■□□□□ 0.56
TUBB3-215ENST00000625617 PAPPA2Q9BXP8 1791 aa18.52■□□□□ 0.55
TUBB3-215ENST00000625617 H7C1W4 665 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 MLLT1Q03111 559 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-215ENST00000625617 GCKRQ14397 625 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 COA1Q9GZY4 146 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 MYH16Q9H6N6 1097 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 LEMD3Q9Y2U8 911 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 PSME4Q14997 1843 aa18.51■□□□□ 0.55
TUBB3-215ENST00000625617 TRPA1O75762 1119 aa18.5■□□□□ 0.55
TUBB3-215ENST00000625617 ITGA6P23229 1130 aa18.5■□□□□ 0.55
TUBB3-215ENST00000625617 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-215ENST00000625617 STRIP1Q5VSL9 837 aa18.5■□□□□ 0.55
TUBB3-215ENST00000625617 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
TUBB3-215ENST00000625617 RNF186Q9NXI6 227 aa18.5■□□□□ 0.55
TUBB3-215ENST00000625617 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 NBPF9Q3BBW0 867 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
TUBB3-215ENST00000625617 RGS19P49795 217 aa18.48■□□□□ 0.55
TUBB3-215ENST00000625617 REM2Q8IYK8 340 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-215ENST00000625617 LINS1Q8NG48 757 aa18.48■□□□□ 0.55
TUBB3-215ENST00000625617 CSRNP1Q96S65 589 aa18.48■□□□□ 0.55
TUBB3-215ENST00000625617 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
TUBB3-215ENST00000625617 WNT10BO00744 389 aa18.47■□□□□ 0.55
TUBB3-215ENST00000625617 KLRK1P26718 216 aa18.47■□□□□ 0.55
TUBB3-215ENST00000625617 KCNJ4P48050 445 aa18.47■□□□□ 0.55
TUBB3-215ENST00000625617 CASP7P55210 303 aa18.47■□□□□ 0.55
TUBB3-215ENST00000625617 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
TUBB3-215ENST00000625617 TXNRD3Q86VQ6 643 aa18.47■□□□□ 0.55
TUBB3-215ENST00000625617 CASP8AP2Q9UKL3 1982 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 SASH1O94885 1247 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 NF2P35240 595 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 TTLL12Q14166 644 aaPredicted RBP18.46■□□□□ 0.55
TUBB3-215ENST00000625617 MOB2Q70IA6 237 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 MYH3P11055 1940 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
TUBB3-215ENST00000625617 CSF1RP07333 972 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 MMP14P50281 582 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 CHRNDQ07001 517 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 PRAMEF18Q5VWM3 479 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 TTLL5Q6EMB2 1281 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 HDAC9Q9UKV0 1011 aa18.45■□□□□ 0.54
TUBB3-215ENST00000625617 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
TUBB3-215ENST00000625617 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
TUBB3-215ENST00000625617 UBE2Q2LH0YL09 131 aa18.44■□□□□ 0.54
TUBB3-215ENST00000625617 APOBEC3FQ8IUX4 373 aaKnown RBP18.44■□□□□ 0.54
TUBB3-215ENST00000625617 GTF2IP78347 998 aa18.43■□□□□ 0.54
TUBB3-215ENST00000625617 VAMP4O75379 141 aa18.42■□□□□ 0.54
TUBB3-215ENST00000625617 CTU1Q7Z7A3 348 aaKnown RBP18.42■□□□□ 0.54
TUBB3-215ENST00000625617 WDR63Q8IWG1 891 aa18.42■□□□□ 0.54
TUBB3-215ENST00000625617 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
TUBB3-215ENST00000625617 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-215ENST00000625617 ZNF646O15015 1829 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-215ENST00000625617 EXOSC9Q06265 439 aaKnown RBP18.41■□□□□ 0.54
TUBB3-215ENST00000625617 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
TUBB3-215ENST00000625617 CD209Q9NNX6 404 aa18.41■□□□□ 0.54
TUBB3-215ENST00000625617 COL1A1P02452 1464 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-215ENST00000625617 F6X3S4 739 aa18.4■□□□□ 0.54
TUBB3-215ENST00000625617 ARMC9Q7Z3E5 817 aa18.4■□□□□ 0.54
TUBB3-215ENST00000625617 ZBED3Q96IU2 234 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-215ENST00000625617 SNAP23O00161 211 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 ANP32CO43423 234 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 TAF5LO75529 589 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 C15orf52Q6ZUT6 534 aaKnown RBP18.39■□□□□ 0.53
TUBB3-215ENST00000625617 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
TUBB3-215ENST00000625617 IRS2Q9Y4H2 1338 aa18.39■□□□□ 0.53
TUBB3-215ENST00000625617 FOXO4P98177 505 aa18.38■□□□□ 0.53
TUBB3-215ENST00000625617 SREBF2Q12772 1141 aa18.38■□□□□ 0.53
TUBB3-215ENST00000625617 MKRN3Q13064 507 aaKnown RBP18.38■□□□□ 0.53
TUBB3-215ENST00000625617 PRKG1Q13976 671 aa18.38■□□□□ 0.53
TUBB3-215ENST00000625617 DLGAP5Q15398 846 aa18.38■□□□□ 0.53
TUBB3-215ENST00000625617 SOX10P56693 466 aa18.37■□□□□ 0.53
TUBB3-215ENST00000625617 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
TUBB3-215ENST00000625617 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
TUBB3-215ENST00000625617 CERS5Q8N5B7 392 aa18.37■□□□□ 0.53
TUBB3-215ENST00000625617 AKAP11Q9UKA4 1901 aa18.37■□□□□ 0.53
TUBB3-215ENST00000625617 GRM8O00222 908 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 TM4SF4P48230 202 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 CCDC57Q2TAC2 916 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-215ENST00000625617 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
TUBB3-215ENST00000625617 ANGEL1Q9UNK9 670 aaKnown RBP18.36■□□□□ 0.53
TUBB3-215ENST00000625617 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms