RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
PNKP-217ENST00000625216 KCNJ4P48050 445 aa15.87■□□□□ 0.13
PNKP-217ENST00000625216 MMP14P50281 582 aa15.87■□□□□ 0.13
PNKP-217ENST00000625216 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
PNKP-217ENST00000625216 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
PNKP-217ENST00000625216 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
PNKP-217ENST00000625216 ABT1Q9ULW3 272 aaKnown RBP15.87■□□□□ 0.13
PNKP-217ENST00000625216 TRAF5O00463 557 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 STRIP1Q5VSL9 837 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 CST9Q5W186 159 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 LDHAL6AQ6ZMR3 332 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 C15orf52Q6ZUT6 534 aaKnown RBP15.86■□□□□ 0.13
PNKP-217ENST00000625216 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 GMLQ99445 158 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 GLIS2Q9BZE0 524 aaPredicted RBP15.86■□□□□ 0.13
PNKP-217ENST00000625216 PCNTO95613 3336 aa15.86■□□□□ 0.13
PNKP-217ENST00000625216 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
PNKP-217ENST00000625216 USP17L8P0C7I0 530 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 VEGFBP49765 207 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
PNKP-217ENST00000625216 ZKSCAN2Q63HK3 967 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 DCPSQ96C86 337 aaKnown RBP15.85■□□□□ 0.13
PNKP-217ENST00000625216 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
PNKP-217ENST00000625216 MYO3BQ8WXR4 1341 aa15.85■□□□□ 0.13
PNKP-217ENST00000625216 MYH3P11055 1940 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 HSPA1AP0DMV8 641 aaKnown RBP15.84■□□□□ 0.13
PNKP-217ENST00000625216 HSPA1BP0DMV9 641 aaKnown RBP15.84■□□□□ 0.13
PNKP-217ENST00000625216 RLBP1P12271 317 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 TRIM27P14373 513 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 FMR1Q06787 632 aaKnown RBP eCLIP15.84■□□□□ 0.13
PNKP-217ENST00000625216 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 KAZALD1Q96I82 304 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 CNNM1Q9NRU3 951 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
PNKP-217ENST00000625216 CELF2O95319 508 aaKnown RBP15.83■□□□□ 0.12
PNKP-217ENST00000625216 EGFRP00533 1210 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 ECE1P42892 770 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 RABL6Q3YEC7 729 aaPredicted RBP15.83■□□□□ 0.12
PNKP-217ENST00000625216 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 TTLL5Q6EMB2 1281 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 KRT26Q7Z3Y9 468 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 OGFOD1Q8N543 542 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 PANK1Q8TE04 598 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 HHIPL1Q96JK4 782 aa15.83■□□□□ 0.12
PNKP-217ENST00000625216 TAF5LO75529 589 aa15.82■□□□□ 0.12
PNKP-217ENST00000625216 HELBQ8NG08 1087 aaPredicted RBP15.82■□□□□ 0.12
PNKP-217ENST00000625216 ZNF594Q96JF6 807 aaPredicted RBP15.82■□□□□ 0.12
PNKP-217ENST00000625216 USP44Q9H0E7 712 aa15.82■□□□□ 0.12
PNKP-217ENST00000625216 CD209Q9NNX6 404 aa15.82■□□□□ 0.12
PNKP-217ENST00000625216 MYOZ2Q9NPC6 264 aa15.82■□□□□ 0.12
PNKP-217ENST00000625216 SCARF1Q14162 830 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 ZNF804AQ7Z570 1209 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 SAPCD2Q86UD0 394 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 SULF1Q8IWU6 871 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 API5Q9BZZ5 524 aaKnown RBP15.81■□□□□ 0.12
PNKP-217ENST00000625216 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
PNKP-217ENST00000625216 BICC1Q9H694 974 aaKnown RBP15.81■□□□□ 0.12
PNKP-217ENST00000625216 HDAC5Q9UQL6 1122 aa15.81■□□□□ 0.12
PNKP-217ENST00000625216 IRS2Q9Y4H2 1338 aa15.8■□□□□ 0.12
PNKP-217ENST00000625216 KLRK1P26718 216 aa15.8■□□□□ 0.12
PNKP-217ENST00000625216 MAP2K1Q02750 393 aaPredicted RBP15.8■□□□□ 0.12
PNKP-217ENST00000625216 UBE4AQ14139 1066 aa15.8■□□□□ 0.12
PNKP-217ENST00000625216 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
PNKP-217ENST00000625216 GGA3Q9NZ52 723 aa15.8■□□□□ 0.12
PNKP-217ENST00000625216 MROH5Q6ZUA9 1318 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 PITPNM2Q9BZ72 1349 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 SNAP23O00161 211 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 IPO8O15397 1037 aaKnown RBP15.79■□□□□ 0.12
PNKP-217ENST00000625216 IL1R1P14778 569 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 GTF2IP78347 998 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 DZIP1LQ8IYY4 767 aaKnown RBP15.79■□□□□ 0.12
PNKP-217ENST00000625216 ANKRD44Q8N8A2 993 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 AIDAQ96BJ3 306 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 CAPNS2Q96L46 248 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 ZNF408Q9H9D4 720 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 WBP1LQ9NX94 342 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 HDAC9Q9UKV0 1011 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 COG6Q9Y2V7 657 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
PNKP-217ENST00000625216 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
PNKP-217ENST00000625216 MAP2K2P36507 400 aa15.78■□□□□ 0.12
PNKP-217ENST00000625216 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
PNKP-217ENST00000625216 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
PNKP-217ENST00000625216 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
PNKP-217ENST00000625216 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
PNKP-217ENST00000625216 CYP4F22Q6NT55 531 aa15.77■□□□□ 0.12
PNKP-217ENST00000625216 FTSJ3Q8IY81 847 aaKnown RBP15.77■□□□□ 0.12
PNKP-217ENST00000625216 TMEM57Q8N5G2 664 aa15.77■□□□□ 0.12
PNKP-217ENST00000625216 MXD3Q9BW11 206 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms