RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 GRM8O00222 908 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 TMCO3Q6UWJ1 677 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 ILDR1Q86SU0 546 aaPredicted RBP16.42■□□□□ 0.22
LDB3-209ENST00000623056 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 ARGLU1Q9NWB6 273 aaPredicted RBP16.42■□□□□ 0.22
LDB3-209ENST00000623056 PCDHA7Q9UN72 937 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 ETF1P62495 437 aaKnown RBP16.42■□□□□ 0.22
LDB3-209ENST00000623056 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 UBXN4Q92575 508 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
LDB3-209ENST00000623056 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
LDB3-209ENST00000623056 SETD1BQ9UPS6 1966 aaKnown RBP16.41■□□□□ 0.22
LDB3-209ENST00000623056 ABCC6O95255 1503 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 NRDCO43847 1150 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 CHGBP05060 677 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 ZRSR1Q15695 479 aaKnown RBP16.41■□□□□ 0.22
LDB3-209ENST00000623056 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 UTYO14607 1347 aa16.41■□□□□ 0.22
LDB3-209ENST00000623056 ZNF609O15014 1411 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
LDB3-209ENST00000623056 NDUFA8P51970 172 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
LDB3-209ENST00000623056 TEX35Q5T0J7 233 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
LDB3-209ENST00000623056 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
LDB3-209ENST00000623056 TEFQ10587 303 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
LDB3-209ENST00000623056 TADA3O75528 432 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 TPM4P67936 248 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 TRIM65Q6PJ69 517 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 MNS1Q8NEH6 495 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 NEDD4P46934 1319 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 MRC1P22897 1456 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 A0A1W2PQ27 194 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 A0A1W2PQ64 194 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 A0A1W2PQD8 194 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 CCP110O43303 1012 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 NCAPHQ15003 741 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
LDB3-209ENST00000623056 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
LDB3-209ENST00000623056 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
LDB3-209ENST00000623056 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
LDB3-209ENST00000623056 MARF1Q9Y4F3 1742 aaKnown RBP16.38■□□□□ 0.21
LDB3-209ENST00000623056 FANCGO15287 622 aa16.38■□□□□ 0.21
LDB3-209ENST00000623056 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
LDB3-209ENST00000623056 ATP5JP18859 108 aa16.38■□□□□ 0.21
LDB3-209ENST00000623056 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
LDB3-209ENST00000623056 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
LDB3-209ENST00000623056 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
LDB3-209ENST00000623056 BIN1O00499 593 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
LDB3-209ENST00000623056 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 CARD6Q9BX69 1037 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 TSPYL1Q9H0U9 437 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 DBNLQ9UJU6 430 aaKnown RBP16.37■□□□□ 0.21
LDB3-209ENST00000623056 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 EFCAB8A8MWE9 144 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 URI1O94763 535 aaPredicted RBP16.37■□□□□ 0.21
LDB3-209ENST00000623056 NLRP12P59046 1061 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 PDE4CQ08493 712 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
LDB3-209ENST00000623056 LAMA4Q16363 1823 aa16.37■□□□□ 0.21
LDB3-209ENST00000623056 FANCCQ00597 558 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 LRRFIP1Q32MZ4 808 aaKnown RBP16.36■□□□□ 0.21
LDB3-209ENST00000623056 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
LDB3-209ENST00000623056 RFX7Q2KHR2 1363 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 ATP8B1O43520 1251 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 SLC3A2P08195 630 aaKnown RBP16.36■□□□□ 0.21
LDB3-209ENST00000623056 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
LDB3-209ENST00000623056 ST5P78524 1137 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 CCDC158Q5M9N0 1113 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 LINC00301Q8NCQ3 95 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
LDB3-209ENST00000623056 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 SASH3O75995 380 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 TPM1P09493 284 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 EXOSC10Q01780 885 aaKnown RBP16.35■□□□□ 0.21
LDB3-209ENST00000623056 STK38Q15208 465 aa16.35■□□□□ 0.21
LDB3-209ENST00000623056 SF3A1Q15459 793 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms