RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 COA1Q9GZY4 146 aa20.22■□□□□ 0.83
DDB2-216ENST00000622878 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
DDB2-216ENST00000622878 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
DDB2-216ENST00000622878 HSPA1AP0DMV8 641 aaKnown RBP20.21■□□□□ 0.83
DDB2-216ENST00000622878 HSPA1BP0DMV9 641 aaKnown RBP20.21■□□□□ 0.83
DDB2-216ENST00000622878 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
DDB2-216ENST00000622878 DACT2Q5SW24 774 aa20.21■□□□□ 0.83
DDB2-216ENST00000622878 ZNF594Q96JF6 807 aaPredicted RBP20.21■□□□□ 0.83
DDB2-216ENST00000622878 SNAP23O00161 211 aa20.2■□□□□ 0.82
DDB2-216ENST00000622878 TAF5LO75529 589 aa20.2■□□□□ 0.82
DDB2-216ENST00000622878 KIF4BQ2VIQ3 1234 aa20.2■□□□□ 0.82
DDB2-216ENST00000622878 RABL6Q3YEC7 729 aaPredicted RBP20.2■□□□□ 0.82
DDB2-216ENST00000622878 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
DDB2-216ENST00000622878 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
DDB2-216ENST00000622878 ABT1Q9ULW3 272 aaKnown RBP20.2■□□□□ 0.82
DDB2-216ENST00000622878 TLL2Q9Y6L7 1015 aa20.2■□□□□ 0.82
DDB2-216ENST00000622878 CELF2O95319 508 aaKnown RBP20.19■□□□□ 0.82
DDB2-216ENST00000622878 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
DDB2-216ENST00000622878 STRIP1Q5VSL9 837 aa20.19■□□□□ 0.82
DDB2-216ENST00000622878 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
DDB2-216ENST00000622878 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
DDB2-216ENST00000622878 HELBQ8NG08 1087 aaPredicted RBP20.19■□□□□ 0.82
DDB2-216ENST00000622878 USP44Q9H0E7 712 aa20.19■□□□□ 0.82
DDB2-216ENST00000622878 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
DDB2-216ENST00000622878 THSD7BQ9C0I4 1608 aa20.18■□□□□ 0.82
DDB2-216ENST00000622878 USP17L8P0C7I0 530 aa20.18■□□□□ 0.82
DDB2-216ENST00000622878 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
DDB2-216ENST00000622878 ANKRD44Q8N8A2 993 aa20.18■□□□□ 0.82
DDB2-216ENST00000622878 MXD3Q9BW11 206 aa20.18■□□□□ 0.82
DDB2-216ENST00000622878 BICC1Q9H694 974 aaKnown RBP20.18■□□□□ 0.82
DDB2-216ENST00000622878 ASTN2O75129 1339 aaPredicted RBP20.18■□□□□ 0.82
DDB2-216ENST00000622878 KCNJ4P48050 445 aa20.17■□□□□ 0.82
DDB2-216ENST00000622878 SAPCD2Q86UD0 394 aa20.17■□□□□ 0.82
DDB2-216ENST00000622878 MIER1Q8N108 512 aa20.17■□□□□ 0.82
DDB2-216ENST00000622878 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
DDB2-216ENST00000622878 WDR33Q9C0J8 1336 aaKnown RBP20.17■□□□□ 0.82
DDB2-216ENST00000622878 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
DDB2-216ENST00000622878 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
DDB2-216ENST00000622878 CD209Q9NNX6 404 aa20.16■□□□□ 0.82
DDB2-216ENST00000622878 SCARF1Q14162 830 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 TTLL5Q6EMB2 1281 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 DCPSQ96C86 337 aaKnown RBP20.15■□□□□ 0.82
DDB2-216ENST00000622878 PUS3Q9BZE2 481 aaKnown RBP20.15■□□□□ 0.82
DDB2-216ENST00000622878 CNNM1Q9NRU3 951 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 GGA3Q9NZ52 723 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 RIPOR2Q9Y4F9 1068 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
DDB2-216ENST00000622878 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 IL1R1P14778 569 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
DDB2-216ENST00000622878 COL13A1Q5TAT6 717 aaPredicted RBP20.14■□□□□ 0.81
DDB2-216ENST00000622878 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 HHIPL1Q96JK4 782 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 CAPNS2Q96L46 248 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 WBP1LQ9NX94 342 aa20.14■□□□□ 0.81
DDB2-216ENST00000622878 NOB1Q9ULX3 412 aaKnown RBP20.14■□□□□ 0.81
DDB2-216ENST00000622878 GTF2IP78347 998 aa20.13■□□□□ 0.81
DDB2-216ENST00000622878 CYP4F22Q6NT55 531 aa20.13■□□□□ 0.81
DDB2-216ENST00000622878 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
DDB2-216ENST00000622878 PLIN1O60240 522 aa20.12■□□□□ 0.81
DDB2-216ENST00000622878 MMP14P50281 582 aa20.12■□□□□ 0.81
DDB2-216ENST00000622878 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
DDB2-216ENST00000622878 FBXW7Q969H0 707 aa20.12■□□□□ 0.81
DDB2-216ENST00000622878 PITPNM2Q9BZ72 1349 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 FOXN1O15353 648 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 ECE1P42892 770 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 UBE4AQ14139 1066 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 NBPF9Q3BBW0 867 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 ZNF804AQ7Z570 1209 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 SULF1Q8IWU6 871 aa20.11■□□□□ 0.81
DDB2-216ENST00000622878 MROH5Q6ZUA9 1318 aa20.1■□□□□ 0.81
DDB2-216ENST00000622878 LRRC24Q50LG9 513 aa20.1■□□□□ 0.81
DDB2-216ENST00000622878 OGFOD1Q8N543 542 aa20.1■□□□□ 0.81
DDB2-216ENST00000622878 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
DDB2-216ENST00000622878 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
DDB2-216ENST00000622878 API5Q9BZZ5 524 aaKnown RBP20.1■□□□□ 0.81
DDB2-216ENST00000622878 WNT10BO00744 389 aa20.09■□□□□ 0.81
DDB2-216ENST00000622878 RFX5P48382 616 aaPredicted RBP20.09■□□□□ 0.81
DDB2-216ENST00000622878 KIAA0825Q8IV33 1275 aa20.09■□□□□ 0.81
DDB2-216ENST00000622878 VGLL2Q8N8G2 317 aa20.09■□□□□ 0.81
DDB2-216ENST00000622878 FKBP1AP62942 108 aaKnown RBP20.08■□□□□ 0.81
DDB2-216ENST00000622878 PAXIP1Q6ZW49 1069 aaPredicted RBP20.08■□□□□ 0.81
DDB2-216ENST00000622878 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.81
DDB2-216ENST00000622878 ARHGAP45Q92619 1136 aa20.08■□□□□ 0.81
DDB2-216ENST00000622878 CDCA5Q96FF9 252 aa20.08■□□□□ 0.81
DDB2-216ENST00000622878 FAM84BQ96KN1 310 aaPredicted RBP20.08■□□□□ 0.81
DDB2-216ENST00000622878 GBA2Q9HCG7 927 aaPredicted RBP20.08■□□□□ 0.81
DDB2-216ENST00000622878 AOC2O75106 756 aa20.07■□□□□ 0.8
DDB2-216ENST00000622878 SASH1O94885 1247 aa20.07■□□□□ 0.8
DDB2-216ENST00000622878 MAP2K2P36507 400 aa20.07■□□□□ 0.8
DDB2-216ENST00000622878 HUNKP57058 714 aa20.07■□□□□ 0.8
DDB2-216ENST00000622878 MAP2K1Q02750 393 aaPredicted RBP20.07■□□□□ 0.8
DDB2-216ENST00000622878 TDRD7Q8NHU6 1098 aaKnown RBP20.07■□□□□ 0.8
DDB2-216ENST00000622878 FAM205AQ6ZU69 1335 aa20.06■□□□□ 0.8
DDB2-216ENST00000622878 GYG1P46976 350 aa20.06■□□□□ 0.8
DDB2-216ENST00000622878 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
DDB2-216ENST00000622878 PDE8BO95263 885 aa20.05■□□□□ 0.8
DDB2-216ENST00000622878 HIBADHP31937 336 aaKnown RBP20.05■□□□□ 0.8
DDB2-216ENST00000622878 PTPN12Q05209 780 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms