RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ZNF594Q96JF6 807 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-218ENST00000622755 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
CBWD3-218ENST00000622755 PSME4Q14997 1843 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 TAF5LO75529 589 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 METTL24Q5JXM2 366 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 VPS37DQ86XT2 251 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
CBWD3-218ENST00000622755 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
CBWD3-218ENST00000622755 DCPSQ96C86 337 aaKnown RBP15.41■□□□□ 0.06
CBWD3-218ENST00000622755 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
CBWD3-218ENST00000622755 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
CBWD3-218ENST00000622755 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
CBWD3-218ENST00000622755 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
CBWD3-218ENST00000622755 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
CBWD3-218ENST00000622755 RBM26Q5T8P6 1007 aaKnown RBP15.4■□□□□ 0.06
CBWD3-218ENST00000622755 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
CBWD3-218ENST00000622755 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
CBWD3-218ENST00000622755 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 ZBTB22O15209 634 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-218ENST00000622755 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-218ENST00000622755 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
CBWD3-218ENST00000622755 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
CBWD3-218ENST00000622755 KCNQ5Q9NR82 932 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
CBWD3-218ENST00000622755 ZNF609O15014 1411 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
CBWD3-218ENST00000622755 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-218ENST00000622755 BCAR3O75815 825 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 HTRA3P83110 453 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 KAZALD1Q96I82 304 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 CD209Q9NNX6 404 aa15.38■□□□□ 0.05
CBWD3-218ENST00000622755 MS4A1P11836 297 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 GTF2IP78347 998 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
CBWD3-218ENST00000622755 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
CBWD3-218ENST00000622755 TRIM27P14373 513 aa15.36■□□□□ 0.05
CBWD3-218ENST00000622755 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
CBWD3-218ENST00000622755 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
CBWD3-218ENST00000622755 MYOZ2Q9NPC6 264 aa15.36■□□□□ 0.05
CBWD3-218ENST00000622755 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
CBWD3-218ENST00000622755 LRRFIP2Q9Y608 721 aaKnown RBP15.36■□□□□ 0.05
CBWD3-218ENST00000622755 PDE8BO95263 885 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
CBWD3-218ENST00000622755 WTIPA6NIX2 430 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 EYA2O00167 538 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 GNAI2P04899 355 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 SLC5A1P13866 664 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 IL1R1P14778 569 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 ZNF280AP59817 542 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 MEIS3Q99687 375 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 MYO1BO43795 1136 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 KLRK1P26718 216 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 ECE1P42892 770 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
CBWD3-218ENST00000622755 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 CEP126Q9P2H0 1117 aa15.34■□□□□ 0.05
CBWD3-218ENST00000622755 CIAO1O76071 339 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 HIRAP54198 1017 aaPredicted RBP15.33■□□□□ 0.04
CBWD3-218ENST00000622755 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.04
CBWD3-218ENST00000622755 SCARF1Q14162 830 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 KIAA0825Q8IV33 1275 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 GMLQ99445 158 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 SIL1Q9H173 461 aa15.33■□□□□ 0.04
CBWD3-218ENST00000622755 CNTNAP1P78357 1384 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 SNAP23O00161 211 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 TRAF5O00463 557 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 SASH1O94885 1247 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-218ENST00000622755 PTPN12Q05209 780 aaKnown RBP15.32■□□□□ 0.04
CBWD3-218ENST00000622755 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
CBWD3-218ENST00000622755 NF2P35240 595 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms