RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.85■□□□□ 0.93
FAM3A-222ENST00000621967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.85■□□□□ 0.93
FAM3A-222ENST00000621967 CCDC171Q6TFL3 1326 aa20.85■□□□□ 0.93
FAM3A-222ENST00000621967 DDX60Q8IY21 1712 aaKnown RBP20.85■□□□□ 0.93
FAM3A-222ENST00000621967 HIP1O00291 1037 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 PDE8AO60658 829 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
FAM3A-222ENST00000621967 G3BP1Q13283 466 aaKnown RBP eCLIP20.84■□□□□ 0.93
FAM3A-222ENST00000621967 NECTIN1Q15223 517 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 PLA2G12BQ9BX93 195 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 ZSWIM6Q9HCJ5 1215 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 NRXN2Q9P2S2 1712 aa20.84■□□□□ 0.93
FAM3A-222ENST00000621967 SYAP1Q96A49 352 aaPredicted RBP20.84■□□□□ 0.93
FAM3A-222ENST00000621967 ZSCAN22P10073 491 aaPredicted RBP20.83■□□□□ 0.93
FAM3A-222ENST00000621967 EPHA10Q5JZY3 1008 aa20.83■□□□□ 0.93
FAM3A-222ENST00000621967 CHMP3Q9Y3E7 222 aa20.83■□□□□ 0.93
FAM3A-222ENST00000621967 MYH3P11055 1940 aa20.83■□□□□ 0.92
FAM3A-222ENST00000621967 CTSWP56202 376 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 USP48Q86UV5 1035 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 FOXO4P98177 505 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 ADCK5Q3MIX3 580 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 PRPF40BQ6NWY9 871 aaKnown RBP20.82■□□□□ 0.92
FAM3A-222ENST00000621967 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
FAM3A-222ENST00000621967 STX6O43752 255 aa20.81■□□□□ 0.92
FAM3A-222ENST00000621967 GADD45BO75293 160 aaPredicted RBP20.81■□□□□ 0.92
FAM3A-222ENST00000621967 LARGE1O95461 756 aa20.81■□□□□ 0.92
FAM3A-222ENST00000621967 SYT1P21579 422 aa20.81■□□□□ 0.92
FAM3A-222ENST00000621967 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
FAM3A-222ENST00000621967 MAP4K1Q92918 833 aa20.81■□□□□ 0.92
FAM3A-222ENST00000621967 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
FAM3A-222ENST00000621967 JAKMIP1Q96N16 626 aaKnown RBP20.81■□□□□ 0.92
FAM3A-222ENST00000621967 SH2B1Q9NRF2 756 aaPredicted RBP20.81■□□□□ 0.92
FAM3A-222ENST00000621967 CPA1P15085 419 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 CCDC85AQ96PX6 553 aaPredicted RBP20.8■□□□□ 0.92
FAM3A-222ENST00000621967 PDRG1Q9NUG6 133 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 SMC3Q9UQE7 1217 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 MED23Q9ULK4 1368 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
FAM3A-222ENST00000621967 TLR7Q9NYK1 1049 aaKnown RBP20.8■□□□□ 0.92
FAM3A-222ENST00000621967 RBM8AQ9Y5S9 174 aaKnown RBP20.8■□□□□ 0.92
FAM3A-222ENST00000621967 TNRC6CQ9HCJ0 1690 aaKnown RBP20.8■□□□□ 0.92
FAM3A-222ENST00000621967 F13A1P00488 732 aa20.79■□□□□ 0.92
FAM3A-222ENST00000621967 NMIQ13287 307 aaPredicted RBP20.79■□□□□ 0.92
FAM3A-222ENST00000621967 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
FAM3A-222ENST00000621967 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
FAM3A-222ENST00000621967 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
FAM3A-222ENST00000621967 CCDC8Q9H0W5 538 aaPredicted RBP20.79■□□□□ 0.92
FAM3A-222ENST00000621967 GDPD2Q9HCC8 539 aa20.79■□□□□ 0.92
FAM3A-222ENST00000621967 CREB3L3Q68CJ9 461 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
FAM3A-222ENST00000621967 C3orf67Q6ZVT6 689 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 NAP1L5Q96NT1 182 aaPredicted RBP20.78■□□□□ 0.92
FAM3A-222ENST00000621967 LARP6Q9BRS8 491 aaKnown RBP20.78■□□□□ 0.92
FAM3A-222ENST00000621967 BRIP1Q9BX63 1249 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 TSPY26PQ9H489 355 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 SPON1Q9HCB6 807 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
FAM3A-222ENST00000621967 CSF1RP07333 972 aa20.77■□□□□ 0.92
FAM3A-222ENST00000621967 ST3GAL1Q11201 340 aa20.77■□□□□ 0.92
FAM3A-222ENST00000621967 SF3B3Q15393 1217 aaKnown RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 CCDC57Q2TAC2 916 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 SIL1Q9H173 461 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 GREM2Q9H772 168 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 CNPY2Q9Y2B0 182 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 ATP6V1DQ9Y5K8 247 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 ANKRD31Q8N7Z5 1873 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 A0A0D9SFI3 127 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 PDE6BP35913 854 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 RFX5P48382 616 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 IFIT5Q13325 482 aaKnown RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 FOXD4L6Q3SYB3 417 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 FOXD4L3Q6VB84 417 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-222ENST00000621967 CCDC83Q8IWF9 413 aa20.76■□□□□ 0.91
FAM3A-222ENST00000621967 C10orf71Q711Q0 1435 aa20.75■□□□□ 0.91
FAM3A-222ENST00000621967 GJB2P29033 226 aa20.75■□□□□ 0.91
FAM3A-222ENST00000621967 KLHDC4Q8TBB5 520 aa20.75■□□□□ 0.91
FAM3A-222ENST00000621967 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
FAM3A-222ENST00000621967 RFX7Q2KHR2 1363 aa20.75■□□□□ 0.91
FAM3A-222ENST00000621967 SLC27A2O14975 620 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 ITGA6P23229 1130 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 MSNP26038 577 aaKnown RBP20.74■□□□□ 0.91
FAM3A-222ENST00000621967 PTGER2P43116 358 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 UBE2HP62256 183 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 RPGRQ92834 1020 aaKnown RBP20.74■□□□□ 0.91
FAM3A-222ENST00000621967 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
FAM3A-222ENST00000621967 BOLA2Q9H3K6 86 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 MTMR6Q9Y217 621 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 ANKRD18BA2A2Z9 1011 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 PSMA5P28066 241 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 ME3Q16798 604 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 TAF7LQ5H9L4 462 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 KLHL34Q8N239 644 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
FAM3A-222ENST00000621967 LAMA4Q16363 1823 aa20.73■□□□□ 0.91
FAM3A-222ENST00000621967 RTL9Q8NET4 1388 aa20.73■□□□□ 0.91
FAM3A-222ENST00000621967 CCDC183Q5T5S1 534 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms