RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CXCL9Q07325 125 aa17.79■□□□□ 0.44
CBWD3-217ENST00000621474 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
CBWD3-217ENST00000621474 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
CBWD3-217ENST00000621474 POTECB2RU33 542 aa17.78■□□□□ 0.44
CBWD3-217ENST00000621474 SASH1O94885 1247 aa17.78■□□□□ 0.44
CBWD3-217ENST00000621474 PUM3Q15397 648 aaKnown RBP17.77■□□□□ 0.44
CBWD3-217ENST00000621474 SCN4AP35499 1836 aa17.77■□□□□ 0.44
CBWD3-217ENST00000621474 RAD17O75943 681 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
CBWD3-217ENST00000621474 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 GPC2Q8N158 579 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 COA1Q9GZY4 146 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 PCDHB15Q9Y5E8 787 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 TFCP2Q12800 502 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-217ENST00000621474 FAM84BQ96KN1 310 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-217ENST00000621474 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
CBWD3-217ENST00000621474 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
CBWD3-217ENST00000621474 SURF6O75683 361 aaKnown RBP17.75■□□□□ 0.43
CBWD3-217ENST00000621474 GYG1P46976 350 aa17.75■□□□□ 0.43
CBWD3-217ENST00000621474 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-217ENST00000621474 CD209Q9NNX6 404 aa17.75■□□□□ 0.43
CBWD3-217ENST00000621474 MYH13Q9UKX3 1938 aa17.75■□□□□ 0.43
CBWD3-217ENST00000621474 PSMD14O00487 310 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 ZNF609O15014 1411 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 SCNN1DP51172 638 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 G3BP1Q13283 466 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBWD3-217ENST00000621474 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 LPIN2Q92539 896 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
CBWD3-217ENST00000621474 IL1R1P14778 569 aa17.73■□□□□ 0.43
CBWD3-217ENST00000621474 ATP2B3Q16720 1220 aa17.73■□□□□ 0.43
CBWD3-217ENST00000621474 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
CBWD3-217ENST00000621474 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
CBWD3-217ENST00000621474 KIF3CO14782 793 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 G3V3G9 751 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
CBWD3-217ENST00000621474 BCAMP50895 628 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 TIMM10P62072 90 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 DCAF8Q5TAQ9 597 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 ZNF804AQ7Z570 1209 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
CBWD3-217ENST00000621474 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
CBWD3-217ENST00000621474 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
CBWD3-217ENST00000621474 HMMRO75330 724 aa17.71■□□□□ 0.43
CBWD3-217ENST00000621474 IFIT1P09914 478 aaKnown RBP17.71■□□□□ 0.43
CBWD3-217ENST00000621474 SLC5A1P13866 664 aa17.71■□□□□ 0.43
CBWD3-217ENST00000621474 ADORA1P30542 326 aa17.71■□□□□ 0.43
CBWD3-217ENST00000621474 HIBADHP31937 336 aaKnown RBP17.71■□□□□ 0.43
CBWD3-217ENST00000621474 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-217ENST00000621474 TDRD7Q8NHU6 1098 aaKnown RBP17.71■□□□□ 0.43
CBWD3-217ENST00000621474 ADAMTSL1Q8N6G6 1762 aa17.7■□□□□ 0.42
CBWD3-217ENST00000621474 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-217ENST00000621474 GMPSP49915 693 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-217ENST00000621474 TNIP1Q15025 636 aa17.7■□□□□ 0.42
CBWD3-217ENST00000621474 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
CBWD3-217ENST00000621474 MXD3Q9BW11 206 aa17.7■□□□□ 0.42
CBWD3-217ENST00000621474 SHTN1A0MZ66 631 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 USP17L3A6NCW0 530 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 USP17L4A6NCW7 530 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 STRIP1Q5VSL9 837 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 GMLQ99445 158 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 EPS15P42566 896 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 GTF2IP78347 998 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-217ENST00000621474 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 CAVIN4Q5BKX8 364 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-217ENST00000621474 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 IQSEC3Q9UPP2 1182 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-217ENST00000621474 AKAP2Q9Y2D5 859 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
CBWD3-217ENST00000621474 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-217ENST00000621474 PHKA1P46020 1223 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 TTLL5Q6EMB2 1281 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 EAF2Q96CJ1 260 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-217ENST00000621474 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
CBWD3-217ENST00000621474 AKAP11Q9UKA4 1901 aa17.67■□□□□ 0.42
CBWD3-217ENST00000621474 AAMPQ13685 434 aa17.67■□□□□ 0.42
CBWD3-217ENST00000621474 CCDC102BQ68D86 513 aa17.67■□□□□ 0.42
CBWD3-217ENST00000621474 DPF2Q92785 391 aa17.67■□□□□ 0.42
CBWD3-217ENST00000621474 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
CBWD3-217ENST00000621474 FAM205AQ6ZU69 1335 aa17.67■□□□□ 0.42
CBWD3-217ENST00000621474 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 ERC1Q8IUD2 1116 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
CBWD3-217ENST00000621474 HACL1Q9UJ83 578 aa17.66■□□□□ 0.42
CBWD3-217ENST00000621474 IQCA1LA6NCM1 817 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms