RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 WASHC4Q2M389 1173 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 B4GALNT3Q6L9W6 998 aa16.85■□□□□ 0.29
NEK3-210ENST00000620675 RWDD1Q9H446 243 aaPredicted RBP16.85■□□□□ 0.29
NEK3-210ENST00000620675 A0A1B0GUL7 405 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
NEK3-210ENST00000620675 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 CCDC8Q9H0W5 538 aaPredicted RBP16.84■□□□□ 0.29
NEK3-210ENST00000620675 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 SMC5Q8IY18 1101 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
NEK3-210ENST00000620675 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.29
NEK3-210ENST00000620675 AKAP11Q9UKA4 1901 aa16.83■□□□□ 0.29
NEK3-210ENST00000620675 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
NEK3-210ENST00000620675 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
NEK3-210ENST00000620675 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.28
NEK3-210ENST00000620675 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
NEK3-210ENST00000620675 PSME4Q14997 1843 aa16.83■□□□□ 0.28
NEK3-210ENST00000620675 LMNB1P20700 586 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 BCAMP50895 628 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 LPIN2Q92539 896 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 FAM84BQ96KN1 310 aaPredicted RBP16.82■□□□□ 0.28
NEK3-210ENST00000620675 DBNDD2Q9BQY9 259 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 ZC3H12CQ9C0D7 883 aaKnown RBP16.82■□□□□ 0.28
NEK3-210ENST00000620675 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
NEK3-210ENST00000620675 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
NEK3-210ENST00000620675 XAGE2Q96GT9 111 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
NEK3-210ENST00000620675 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
NEK3-210ENST00000620675 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 AACSQ86V21 672 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 SLC5A1P13866 664 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 PHKA1P46020 1223 aa16.81■□□□□ 0.28
NEK3-210ENST00000620675 C15orf52Q6ZUT6 534 aaKnown RBP16.8■□□□□ 0.28
NEK3-210ENST00000620675 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
NEK3-210ENST00000620675 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
NEK3-210ENST00000620675 EYA3Q99504 573 aa16.8■□□□□ 0.28
NEK3-210ENST00000620675 GPR108Q9NPR9 543 aa16.8■□□□□ 0.28
NEK3-210ENST00000620675 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
NEK3-210ENST00000620675 ECE2O60344 883 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 IFIT1P09914 478 aaKnown RBP16.79■□□□□ 0.28
NEK3-210ENST00000620675 FBXO33Q7Z6M2 555 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
NEK3-210ENST00000620675 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 CD209Q9NNX6 404 aa16.79■□□□□ 0.28
NEK3-210ENST00000620675 CCDC102BQ68D86 513 aa16.78■□□□□ 0.28
NEK3-210ENST00000620675 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
NEK3-210ENST00000620675 PPP4R2Q9NY27 417 aa16.78■□□□□ 0.28
NEK3-210ENST00000620675 HIBADHP31937 336 aaKnown RBP16.77■□□□□ 0.28
NEK3-210ENST00000620675 SCARF1Q14162 830 aa16.77■□□□□ 0.28
NEK3-210ENST00000620675 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
NEK3-210ENST00000620675 ZNF541Q9H0D2 1346 aa16.77■□□□□ 0.28
NEK3-210ENST00000620675 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.27
NEK3-210ENST00000620675 RAD17O75943 681 aa16.77■□□□□ 0.27
NEK3-210ENST00000620675 NIM1KQ8IY84 436 aa16.77■□□□□ 0.27
NEK3-210ENST00000620675 MXD3Q9BW11 206 aa16.77■□□□□ 0.27
NEK3-210ENST00000620675 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.27
NEK3-210ENST00000620675 NUCB1Q02818 461 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 ERICH6BQ5W0A0 696 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 ZNF804AQ7Z570 1209 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
NEK3-210ENST00000620675 G3V3G9 751 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 FZD9O00144 591 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 IL1R1P14778 569 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 CXCL9Q07325 125 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 VPS37DQ86XT2 251 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
NEK3-210ENST00000620675 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
NEK3-210ENST00000620675 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
NEK3-210ENST00000620675 PDE4AP27815 886 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 SALL3Q9BXA9 1300 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 MCAMP43121 646 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 SNRKQ9NRH2 765 aa16.74■□□□□ 0.27
NEK3-210ENST00000620675 PSMD14O00487 310 aa16.73■□□□□ 0.27
NEK3-210ENST00000620675 GTF2IP78347 998 aa16.73■□□□□ 0.27
NEK3-210ENST00000620675 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
NEK3-210ENST00000620675 GRIK5Q16478 980 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms