RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	DPY19L2	Q6NUT2	758 aa		13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	C15orf52	Q6ZUT6	534 aa	Known RBP	13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	GPC2	Q8N158	579 aa		13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	SSH3	Q8TE77	659 aa		13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	GJA3	Q9Y6H8	435 aa		13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	ADAMTSL1	Q8N6G6	1762 aa		13.45	□□□□□ -0.26
TARDBP-223	ENST00000620632	PSMD14	O00487	310 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	PDE8B	O95263	885 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	FGFR2	P21802	821 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	SCNN1D	P51172	638 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	UBE4A	Q14139	1066 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	CIAPIN1	Q6FI81	312 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	SIRT2	Q8IXJ6	389 aa		13.44	□□□□□ -0.26
TARDBP-223	ENST00000620632	SHTN1	A0MZ66	631 aa		13.43	□□□□□ -0.26
TARDBP-223	ENST00000620632	FBXO3	Q9UK99	471 aa		13.43	□□□□□ -0.26
TARDBP-223	ENST00000620632	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.43	□□□□□ -0.26
TARDBP-223	ENST00000620632	SASH1	O94885	1247 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	IL15	P40933	162 aa	Predicted RBP	13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	GYG1	P46976	350 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	GMPS	P49915	693 aa	Predicted RBP	13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	PODN	Q7Z5L7	613 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	FAM84B	Q96KN1	310 aa	Predicted RBP	13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	CRBN	Q96SW2	442 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	MXD3	Q9BW11	206 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	COA1	Q9GZY4	146 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632	CD209	Q9NNX6	404 aa		13.42	□□□□□ -0.26
TARDBP-223	ENST00000620632		G3V3G9	751 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	VIL1	P09327	827 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	POTEI	P0CG38	1075 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	POTEJ	P0CG39	1038 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	VEGFA	P15692	232 aa	Predicted RBP	13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	EPS15	P42566	896 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	TFCP2	Q12800	502 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	PUM3	Q15397	648 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	DCAF8	Q5TAQ9	597 aa		13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-223	ENST00000620632	ZNF609	O15014	1411 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	POLR2A	P24928	1970 aa	Known RBP	13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	IL1R1	P14778	569 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	TNIP1	Q15025	636 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	DACT2	Q5SW24	774 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	GPRC5D	Q9NZD1	345 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	CEP126	Q9P2H0	1117 aa		13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	NOP58	Q9Y2X3	529 aa	Known RBP	13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	COL1A1	P02452	1464 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-223	ENST00000620632	USP17L3	A6NCW0	530 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	USP17L4	A6NCW7	530 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	SURF6	O75683	361 aa	Known RBP	13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	ADORA1	P30542	326 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	BCAM	P50895	628 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	ATP2B3	Q16720	1220 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	USP17L1	Q7RTZ2	530 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	ZNF804A	Q7Z570	1209 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	FBXO33	Q7Z6M2	555 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	LPIN2	Q92539	896 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	GML	Q99445	158 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	HACL1	Q9UJ83	578 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	JAG2	Q9Y219	1238 aa		13.39	□□□□□ -0.27
TARDBP-223	ENST00000620632	IQCA1L	A6NCM1	817 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	EGFR	P00533	1210 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	SLC5A1	P13866	664 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	HIBADH	P31937	336 aa	Known RBP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	EPHX2	P34913	555 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	TIMM10	P62072	90 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	GTF2I	P78347	998 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	CERS5	Q8N5B7	392 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	TDRD7	Q8NHU6	1098 aa	Known RBP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	FBXW7	Q969H0	707 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	EXOC6B	Q9Y2D4	811 aa		13.38	□□□□□ -0.27
TARDBP-223	ENST00000620632	AKAP11	Q9UKA4	1901 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632		A0A1B0GUL7	405 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	IFIT1	P09914	478 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	STRIP1	Q5VSL9	837 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	TTLL5	Q6EMB2	1281 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	MICALL2	Q8IY33	904 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	TRPM4	Q8TD43	1214 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	CHMP4B	Q9H444	224 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	CNOT7	Q9UIV1	285 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	PCDHB15	Q9Y5E8	787 aa		13.37	□□□□□ -0.27
TARDBP-223	ENST00000620632	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	TOMM70	O94826	608 aa		13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	RPS12	P25398	132 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	LMOD1	P29536	600 aa	Predicted RBP	13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	PHKA1	P46020	1223 aa		13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	HIRA	P54198	1017 aa	Predicted RBP	13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	DPF2	Q92785	391 aa		13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	ECM29	Q5VYK3	1845 aa		13.36	□□□□□ -0.27
TARDBP-223	ENST00000620632	OS9	Q13438	667 aa	Predicted RBP	13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	EAPP	Q56P03	285 aa	Predicted RBP	13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	CAVIN4	Q5BKX8	364 aa		13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	SAMD7	Q7Z3H4	446 aa		13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	AGBL3	Q8NEM8	1001 aa		13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	XAGE2	Q96GT9	111 aa		13.35	□□□□□ -0.27
TARDBP-223	ENST00000620632	ADARB2	Q9NS39	739 aa	Known RBP	13.35	□□□□□ -0.27

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