RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 TRPM3Q9HCF6 1732 aaPredicted RBP15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 A0A1B0GVL5 298 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 LMAN1P49257 510 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CCDC129Q6ZRS4 1044 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CEP57L1Q8IYX8 460 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
CNTNAP3B-215ENST00000619138 EXOC5O00471 708 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 KRBA2Q6ZNG9 492 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ARGLU1Q9NWB6 273 aaPredicted RBP15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CHGBP05060 677 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 G3BP1Q13283 466 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ST3GAL1Q11201 340 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CARD6Q9BX69 1037 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 XIRP1Q702N8 1843 aaKnown RBP15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 RGPD1P0DJD0 1748 aa15.98■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 NCOA5Q9HCD5 579 aaKnown RBP15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ANKRD65E5RJM6 399 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CLCN6P51797 869 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 STX1AQ16623 288 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CPDO75976 1380 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 TOMM22Q9NS69 142 aa15.97■□□□□ 0.15
CNTNAP3B-215ENST00000619138 CWF19L2Q2TBE0 894 aaKnown RBP15.96■□□□□ 0.15
CNTNAP3B-215ENST00000619138 PLA2G4DQ86XP0 818 aa15.96■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SEC62Q99442 399 aaKnown RBP15.96■□□□□ 0.15
CNTNAP3B-215ENST00000619138 STAP2Q9UGK3 403 aa15.96■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SLC27A2O14975 620 aa15.96■□□□□ 0.15
CNTNAP3B-215ENST00000619138 SERPINC1P01008 464 aa15.96■□□□□ 0.14
CNTNAP3B-215ENST00000619138 TDRD7Q8NHU6 1098 aaKnown RBP15.96■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 A0A0D9SFI3 127 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 Q6ZUG5 572 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 MAP3K2Q9Y2U5 619 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CEMIPQ8WUJ3 1361 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 PHACTR2O75167 634 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CFAP100Q494V2 611 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
CNTNAP3B-215ENST00000619138 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 XPO4Q9C0E2 1151 aaKnown RBP15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ANO10Q9NW15 660 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ST5P78524 1137 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 STK38Q15208 465 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 MCM6Q14566 821 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 TLR7Q9NYK1 1049 aaKnown RBP15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 RSPH14Q9UHP6 348 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CFAP45Q9UL16 551 aa15.94■□□□□ 0.14
CNTNAP3B-215ENST00000619138 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 PDIA4P13667 645 aaKnown RBP15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 UTP14AQ9BVJ6 771 aaKnown RBP15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ZNF446Q9NWS9 450 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 GPATCH11Q8N954 259 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 XAGE3Q8WTP9 111 aa15.93■□□□□ 0.14
CNTNAP3B-215ENST00000619138 TRIM66O15016 1216 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 TPM4P67936 248 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 USP28Q96RU2 1077 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 PNMA6AP0CW24 399 aaPredicted RBP15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CAPN2P17655 700 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 GPS2Q13227 327 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 SSH3Q8TE77 659 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 APPP05067 770 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 DDB1Q16531 1140 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 HSP90AB4PQ58FF6 505 aa15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ZNF589Q86UQ0 364 aaPredicted RBP15.92■□□□□ 0.14
CNTNAP3B-215ENST00000619138 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 OAS2P29728 719 aaKnown RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 EVCP57679 992 aa15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 GNG11P61952 73 aa15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 KARSQ15046 597 aaKnown RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 RAD51AP2Q09MP3 1159 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms