RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 TSPY2A6NKD2 308 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 GOLGA5Q8TBA6 731 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 MAK16Q9BXY0 300 aaKnown RBP8.16□□□□□ -1.1
CSMD2-210ENST00000619121 CHD4Q14839 1912 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 TTC41PQ6P2S7 1318 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 PPP2R1AP30153 589 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
CSMD2-210ENST00000619121 CFAP100Q494V2 611 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 NUP58Q9BVL2 599 aa8.16□□□□□ -1.1
CSMD2-210ENST00000619121 DNMT1P26358 1616 aaKnown RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 GALNT17Q6IS24 598 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 OPTNQ96CV9 577 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 YEATS2Q9ULM3 1422 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 WASLO00401 505 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 WDR66Q8TBY9 1149 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 IFT122Q9HBG6 1241 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 GPHNQ9NQX3 736 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 CFAP58Q5T655 872 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 RRP36Q96EU6 259 aaKnown RBP8.15□□□□□ -1.1
CSMD2-210ENST00000619121 ABCF2Q9UG63 623 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 CDC42BPAQ5VT25 1732 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 PPFIA1Q13136 1202 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 CCDC65Q8IXS2 484 aa8.15□□□□□ -1.1
CSMD2-210ENST00000619121 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 TRIM37O94972 964 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 GSDMBQ8TAX9 411 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 SMC6Q96SB8 1091 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.11
CSMD2-210ENST00000619121 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.11
CSMD2-210ENST00000619121 PTPN14Q15678 1187 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 CCDC102BQ68D86 513 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 IFT74Q96LB3 600 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 PARP2Q9UGN5 583 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 LIMCH1Q9UPQ0 1083 aa8.15□□□□□ -1.11
CSMD2-210ENST00000619121 SSR1P43307 286 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 EIF6P56537 245 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 DNAJC21Q5F1R6 531 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 ARFGAP2Q8N6H7 521 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 FBXO3Q9UK99 471 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 RIOK3O14730 519 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 KIAA0556O60303 1618 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 RIMS2Q9UQ26 1411 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 IDH1O75874 414 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 LNPKQ9C0E8 428 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 C19orf44Q9H6X5 657 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 PICK1Q9NRD5 415 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 FRMD4BQ9Y2L6 1034 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 THAP12O43422 761 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 TMPOP42166 694 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 RASSF2P50749 326 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 IPO4Q8TEX9 1081 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 TRAK2O60296 914 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 MYL6BP14649 208 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 SARNPP82979 210 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 ZNF449Q6P9G9 518 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 DNM2P50570 870 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 UBE2HP62256 183 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 TRMT112Q9UI30 125 aaKnown RBP8.14□□□□□ -1.11
CSMD2-210ENST00000619121 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 PPP1R9BQ96SB3 815 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 MNAT1P51948 309 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 CCDC96Q2M329 555 aa8.14□□□□□ -1.11
CSMD2-210ENST00000619121 AMER1Q5JTC6 1135 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 TTLL7Q6ZT98 887 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 NOL8Q76FK4 1167 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 BICD1Q96G01 975 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 MTRF1LQ9UGC7 380 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 DENND2AQ9ULE3 1009 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 IARSP41252 1262 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 APOBRQ0VD83 1088 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 NUP88Q99567 741 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 VCXQ9H320 206 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 IPO5O00410 1097 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 PLCD1P51178 756 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 NOB1Q9ULX3 412 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 GOLGA4Q13439 2230 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 ITSN1Q15811 1721 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 ELL2O00472 640 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 KRT86O43790 486 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 OTUD6AQ7L8S5 288 aa8.13□□□□□ -1.11
CSMD2-210ENST00000619121 LLPHQ9BRT6 129 aaKnown RBP8.13□□□□□ -1.11
CSMD2-210ENST00000619121 CALCOCO1Q9P1Z2 691 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms